RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 SH2D1BO14796 132 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 TPD52L2O43399 206 aaKnown RBP8.74□□□□□ -1.01
LIMA1-201ENST00000341247 HAND1O96004 215 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 CECR9P0C854 216 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 DAOP14920 347 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 ATP6V0CP27449 155 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 S100GP29377 79 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 LINC00205P59089 165 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 NMSQ5H8A3 153 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 Q6ZS49 121 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 SPAG16Q8N0X2 631 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 MRGPRDQ8TDS7 321 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 GTF3AQ92664 365 aaKnown RBP8.74□□□□□ -1.01
LIMA1-201ENST00000341247 RIMS4Q9H426 269 aaPredicted RBP8.74□□□□□ -1.01
LIMA1-201ENST00000341247 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 TM4SF5O14894 197 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 DANCRP0C864 163 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 OR13C7P0DN81 318 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 GABRA2P47869 451 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
LIMA1-201ENST00000341247 TESK1Q15569 626 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 SLC25A24Q6NUK1 477 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 WDR31Q8NA23 367 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 DCTN5Q9BTE1 182 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 TAAR3PQ9P1P4 343 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 CACFD1Q9UGQ2 172 aa8.74□□□□□ -1.01
LIMA1-201ENST00000341247 PLCE1Q9P212 2302 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 TXNL1O43396 289 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 SNAPINO95295 136 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 PGA5P0DJD9 388 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 SPP1P10451 314 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 RAC2P15153 192 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 EDDM3AQ14507 147 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 BTNL3Q6UXE8 466 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 OR52L2PQ8NGH6 319 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 ZFP57Q9NU63 452 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 H0Y980 276 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 IGHG3P01860 377 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 GUK1Q16774 197 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 CD300LFQ8TDQ1 290 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 SARAFQ96BY9 339 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 RARRES2Q99969 163 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 GINS3Q9BRX5 216 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 SAV1Q9H4B6 383 aaPredicted RBP8.73□□□□□ -1.01
LIMA1-201ENST00000341247 PLEKHF2Q9H8W4 249 aa8.73□□□□□ -1.01
LIMA1-201ENST00000341247 PURGQ9UJV8 347 aaKnown RBP8.73□□□□□ -1.01
LIMA1-201ENST00000341247 M0R036 132 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 SNRNP70P08621 437 aaKnown RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 SEC11BP0C7V7 166 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ZNF83P51522 516 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 RND3P61587 244 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 CCL20P78556 96 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 INO80CQ6PI98 192 aaPredicted RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ZNF497Q6ZNH5 498 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 IGLV2-14P01704 120 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 PLA2G5P39877 138 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 DVL1P1P54792 670 aaPredicted RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 Q6ZR03 302 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 LINC00596Q86U02 117 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ODF3L1Q8IXM7 274 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 OR5D13Q8NGL4 314 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 LYRM2Q9NU23 88 aaPredicted RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 PRSS44E7EML9 344 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 PTBP3O95758 552 aaKnown RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 IL2RGP31785 369 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 SNCAP37840 140 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ERVK11-1P61568 191 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 ACSF3Q4G176 576 aaPredicted RBP8.72□□□□□ -1.01
LIMA1-201ENST00000341247 LRP11Q86VZ4 500 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 C2CD4CQ8TF44 421 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
LIMA1-201ENST00000341247 IQCF6A8MYZ5 107 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 K7EM74 188 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 CD5P06127 495 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 CBR1P16152 277 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 GCH1P30793 250 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 SSTR5P35346 364 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 ID3Q02535 119 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 DRAM1Q8N682 238 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 OR2Z1Q8NG97 314 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 OR10Z1Q8NGY1 313 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 RBMXL1Q96E39 390 aaKnown RBP8.71□□□□□ -1.01
LIMA1-201ENST00000341247 OR2D2Q9H210 308 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 MLXQ9UH92 298 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 H7C2Y5 167 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 ATXN7O15265 892 aaPredicted RBP8.71□□□□□ -1.01
LIMA1-201ENST00000341247 TSPAN9O75954 239 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 KRASP01116 189 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 CD82P27701 267 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 GLIPR1P48060 266 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 HAGHQ16775 308 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 SPINK9Q5DT21 86 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms