RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 UBE2UQ5VVX9 321 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 ZNF554Q86TJ5 538 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 ZNF439Q8NDP4 499 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 OR51D1Q8NGF3 324 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 URM1Q9BTM9 101 aaKnown RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 LPAR5Q9H1C0 372 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 OR2S2Q9NQN1 319 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 PLEKHJ1Q9NW61 149 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 V9GY05 133 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 TRAV1-2A0A0B4J238 106 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 M0QZK8 103 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 SOCS1O15524 211 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 FBXO24O75426 580 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 LPLP06858 475 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 CSF1P09603 554 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 CD28P10747 220 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 TMEM11P17152 192 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 IL3RAP26951 378 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 PSMD7P51665 324 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 GNMTQ14749 295 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 CT45A1Q5HYN5 189 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 HES5Q5TA89 166 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 FAM89BQ8N5H3 189 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 CT45A3Q8NHU0 189 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
ERCC1-203ENST00000340192 RTN4IP1Q8WWV3 396 aaPredicted RBP11.64□□□□□ -0.55
ERCC1-203ENST00000340192 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
ERCC1-203ENST00000340192 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
ERCC1-203ENST00000340192 LRRC42Q9Y546 428 aa11.64□□□□□ -0.55
ERCC1-203ENST00000340192 TRDV1A0A1B0GX56 115 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 SHISA3A0PJX4 238 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 NAPSAO96009 420 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 PSMB9P28065 219 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 PPP1CCP36873 323 aaKnown RBP11.63□□□□□ -0.55
ERCC1-203ENST00000340192 OR10A3P58181 314 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 HTD2P86397 168 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 HNF4GQ14541 408 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 C2orf76Q3KRA6 126 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 MORN2Q502X0 79 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 Q6ZPA2 131 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 LYG1Q8N1E2 194 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 OR52L2PQ8NGH6 319 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 GALMQ96C23 342 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 CHMP1AQ9HD42 196 aaPredicted RBP11.63□□□□□ -0.55
ERCC1-203ENST00000340192 STEAP1Q9UHE8 339 aa11.63□□□□□ -0.55
ERCC1-203ENST00000340192 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 FOXI3A8MTJ6 420 aaPredicted RBP11.62□□□□□ -0.55
ERCC1-203ENST00000340192 PDCD5O14737 125 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 GALP22466 123 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 MYL9P24844 172 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 VEGFCP49767 419 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 ZNF137PP52743 207 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 PLA2G7Q13093 441 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 HMGN3Q15651 99 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 C9orf152Q5JTZ5 239 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 STEAP3Q658P3 488 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 C22orf42Q6IC83 251 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 IZUMO1Q8IYV9 350 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 FCGR1BQ92637 280 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 CITED2Q99967 270 aaPredicted RBP11.62□□□□□ -0.55
ERCC1-203ENST00000340192 ABRACLQ9P1F3 81 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 AK3Q9UIJ7 227 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 HSF4Q9ULV5 492 aa11.62□□□□□ -0.55
ERCC1-203ENST00000340192 TMEM272A0A1B0GTI8 110 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 LDLRAD4O15165 306 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 TXNL1O43396 289 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 RANBP1P43487 201 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 TMEM50BP56557 158 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 EBI3Q14213 229 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 NSUN5P1Q3KNT7 163 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
ERCC1-203ENST00000340192 TGIF2LXQ8IUE1 241 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 C5orf56Q8N8D9 126 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 OR5AU1Q8NGC0 362 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 SETD6Q8TBK2 473 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 IL1F10Q8WWZ1 152 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 ARHGAP5-AS1Q96IT6 56 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 EAF1Q96JC9 268 aaPredicted RBP11.61□□□□□ -0.55
ERCC1-203ENST00000340192 HDHD3Q9BSH5 251 aaPredicted RBP11.61□□□□□ -0.55
ERCC1-203ENST00000340192 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
ERCC1-203ENST00000340192 YPEL1O60688 119 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 RGS11O94810 467 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 RAB3BP20337 219 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 CD1BP29016 333 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 PLAC9Q5JTB6 97 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms