RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 LRRC75BQ2VPJ9 315 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 STPG2Q8N412 459 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 PLPP2O43688 288 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 ST6GAL1P15907 406 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 PHIPQ8WWQ0 1821 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 TRDCB7Z8K6 153 aa11.33□□□□□ -0.59
USP47-202ENST00000339865 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.59
USP47-202ENST00000339865 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.59
USP47-202ENST00000339865 HYAL3O43820 417 aaPredicted RBP11.33□□□□□ -0.6
USP47-202ENST00000339865 ZFPL1O95159 310 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 ZNF205O95201 554 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 LURAP1LQ8IV03 231 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 OR10AC1Q8NH08 325 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 VSTM2AQ8TAG5 236 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 C14orf144Q96I85 54 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 KIRREL2Q6UWL6 708 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 PATE1Q8WXA2 126 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 NXPH1P58417 271 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 PTPMT1Q8WUK0 201 aaPredicted RBP11.33□□□□□ -0.6
USP47-202ENST00000339865 ALG1L2C9J202 215 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 NDUFB4O95168 129 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 OR13H1Q8NG92 308 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 GHITMQ9H3K2 345 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 CCL26Q9Y258 94 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 CYB5R3P00387 301 aaPredicted RBP11.33□□□□□ -0.6
USP47-202ENST00000339865 RCC1P18754 421 aaPredicted RBP11.33□□□□□ -0.6
USP47-202ENST00000339865 FZD5Q13467 585 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 ECSCRQ19T08 205 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 OR10S1Q8NGN2 331 aa11.33□□□□□ -0.6
USP47-202ENST00000339865 MOGAT3Q86VF5 341 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 PRDX2P32119 198 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
USP47-202ENST00000339865 ADAD2Q8NCV1 583 aaKnown RBP11.32□□□□□ -0.6
USP47-202ENST00000339865 FOXB1Q99853 325 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 ALKBH7Q9BT30 221 aaPredicted RBP11.32□□□□□ -0.6
USP47-202ENST00000339865 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 PDCD6O75340 191 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 SPINK2P20155 84 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 FRG2CA6NGY1 282 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 DHHO43323 396 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 PPICP45877 212 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 MORN4Q8NDC4 146 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 WIPI2Q9Y4P8 454 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 DSCR4P56555 118 aaPredicted RBP11.32□□□□□ -0.6
USP47-202ENST00000339865 HYAL1Q12794 435 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 SH2D5Q6ZV89 423 aa11.32□□□□□ -0.6
USP47-202ENST00000339865 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 H0YIG0 161 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 OR11G2Q8NGC1 345 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 VCX2Q9H322 139 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 C3P01024 1663 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 TARM1B6A8C7 271 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
USP47-202ENST00000339865 KIAA1644Q3SXP7 199 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 DCTN5Q9BTE1 182 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 LOXL2Q9Y4K0 774 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 GBF1Q92538 1859 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 SNAI2O43623 268 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 PWWP2BQ6NUJ5 590 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 PTOV1Q86YD1 416 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
USP47-202ENST00000339865 DEFB103AP81534 67 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 OR11H7Q8NGC8 314 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 LRRC29Q8WV35 223 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 TM4SF19Q96DZ7 209 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 FRRS1LQ9P0K9 344 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 CLN8Q9UBY8 286 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 FMODQ06828 376 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 SLC26A1Q9H2B4 701 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 OR2A4O95047 310 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 SSTR5P35346 364 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP47-202ENST00000339865 FHL5Q5TD97 284 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 FAM74A4Q5TZK3 123 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 OR2A7Q96R45 310 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 AICDAQ9GZX7 198 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms