RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 CFAP47Q6ZTR5 3102 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 MAP1LC3B2A6NCE7 125 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 PMELP40967 661 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 SRPXP78539 464 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 ID3Q02535 119 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 EXT1Q16394 746 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 C10orf35Q96D05 121 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 MAP1LC3BQ9GZQ8 125 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 COL5A1P20908 1838 aaPredicted RBP13.76□□□□□ -0.21
SCARB1-202ENST00000339570 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF716A6NP11 495 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 BCL2P10415 239 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 UBE2G2P60604 165 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 RNF138Q8WVD3 245 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 SDSLQ96GA7 329 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 TMEM56Q96MV1 263 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 TMEM56-RWDD3S4R434 201 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 BTBD17A6NE02 478 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 IGHV3-13P01766 116 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 IGHV3-7P01780 117 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 TRAPPC2LQ9UL33 140 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 CYTIPO60759 359 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF737O75373 536 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 KLF7O75840 302 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-202ENST00000339570 HBE1P02100 147 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 CHRNA7P36544 502 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 CXCL12P48061 93 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 UCP3P55916 312 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 GGNQ86UU5 652 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 OR4F5Q8NH21 305 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 OR2V1Q8NHB1 315 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 OR4F4Q96R69 305 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 ATG101Q9BSB4 218 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
SCARB1-202ENST00000339570 A0A1B0GUS0 222 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 CRYAAP02489 173 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 S100GP29377 79 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 IL2RGP31785 369 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 CARFQ8N187 725 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 OR10V1Q8NGI7 309 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 ADGRG7Q96K78 797 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 CEP192Q8TEP8 1941 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 CADP27708 2225 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 TSTD3H0UI37 97 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 SYNGR2O43760 224 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 COL8A2P25067 703 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 UCP1P25874 307 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 DDTP30046 118 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 BTNL3Q6UXE8 466 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 IMMP1LQ96LU5 166 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 SEMA5BQ9P283 1151 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 CLN8Q9UBY8 286 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 U3KQA8 63 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
SCARB1-202ENST00000339570 LMO1P25800 156 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 FOLR3P41439 243 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 COL10A1Q03692 680 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 LYSMD4Q5XG99 296 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-202ENST00000339570 FAM234AQ9H0X4 552 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 C11orf1Q9H5F2 150 aa13.74□□□□□ -0.21
SCARB1-202ENST00000339570 XKRY2A2RUG3 117 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
SCARB1-202ENST00000339570 IL24Q13007 206 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 NCR3LG1Q68D85 454 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 TMEM42Q69YG0 159 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 LINC00696Q6ZRV3 163 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 TPRX1Q8N7U7 411 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 OR4X1Q8NH49 305 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 RNF115Q9Y4L5 304 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 LRRC3CA6NJW4 275 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 GJE1A6NN92 205 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
SCARB1-202ENST00000339570 PTBP3O95758 552 aaKnown RBP13.73□□□□□ -0.21
SCARB1-202ENST00000339570 CD33P20138 364 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF295-AS1Q8N0V1 137 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 AGBL5Q8NDL9 886 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 FUT9Q9Y231 359 aa13.73□□□□□ -0.21
SCARB1-202ENST00000339570 MRPS17Q9Y2R5 130 aaKnown RBP13.73□□□□□ -0.21
SCARB1-202ENST00000339570 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 YKT6O15498 198 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 G0S2P27469 103 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
SCARB1-202ENST00000339570 PCBD1P61457 104 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 CLEC18AA5D8T8 446 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 DEGS1O15121 323 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms