RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 OR6C6A6NF89 314 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 SNAI2O43623 268 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 AGFG2O95081 481 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 CNIH1O95406 144 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 HNRNPA2B1P22626 353 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 CD70P32970 193 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC35B1P78383 322 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 LYPD6Q86Y78 171 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF721Q8TF20 911 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF296Q8WUU4 475 aaPredicted RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 GUCD1Q96NT3 240 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 HINT2Q9BX68 163 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 CLEC7AQ9BXN2 247 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF286AQ9HBT8 521 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 HS3ST1O14792 307 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 RBMXL2O75526 392 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CA2P00918 260 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 MGAT2Q10469 447 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 HIST3H3Q16695 136 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 STUMQ69YW2 141 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 DNM1P34Q6PK57 102 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 MRPL21Q7Z2W9 205 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 OR10V1Q8NGI7 309 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 NAT6Q93015 286 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 LHX4Q969G2 390 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SPACA9Q96E40 222 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 GMPPAQ96IJ6 420 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SRSF8Q9BRL6 282 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 TMEM59Q9BXS4 323 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 PSG11Q9UQ72 335 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 ATG2BQ96BY7 2078 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 M0R1X1 148 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC17A3O00476 420 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 FCN1O00602 326 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 ARPC3O15145 178 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 PLP1P60201 277 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 PLPPR5Q32ZL2 321 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CTXN3Q4LDR2 81 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SPATA31B1PQ5VZV4 182 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 RSPO2Q6UXX9 243 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 RD3Q7Z3Z2 195 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 DEFB125Q8N687 156 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 BLNKQ8WV28 456 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 PERPQ96FX8 193 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SUSD3Q96L08 255 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 SIGMAR1Q99720 223 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 NUDT16L1Q9BRJ7 211 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 NAA60Q9H7X0 242 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CENPMQ9NSP4 180 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 CDC42EP3Q9UKI2 254 aa8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 ASCC3Q8N3C0 2202 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-201ENST00000339488 TEX48A0A1B0GUV7 120 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 A0A1W2PS18 150 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 CST5P28325 142 aaPredicted RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 IZUMO4Q1ZYL8 232 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 LHFPL2Q6ZUX7 228 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF467Q7Z7K2 595 aaPredicted RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 DNAJB12Q9NXW2 375 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 MCTS1Q9ULC4 181 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 CACNA1DQ01668 2161 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 IGKV1-8A0A0C4DH67 115 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 MEGF11A6BM72 1044 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 TMEM14DPA8MWL7 114 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 NPPCP23582 126 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 C6orf201Q7Z4U5 140 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 COMMD2Q86X83 199 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 OR51T1Q8NGJ9 327 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 SSC4DQ8WTU2 575 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 TAAR3PQ9P1P4 343 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 HCRTR1O43613 425 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC16A7O60669 478 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 IGKV1D-33P01593 117 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 IGKV1-33P01594 117 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 SERPINE2P07093 398 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 LCN2P80188 198 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 RPL18Q07020 188 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC22A24Q8N4F4 322 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 KIR3DL3Q8N743 410 aa8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 BAHD1Q8TBE0 780 aaPredicted RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-201ENST00000339488 ADAM20O43506 726 aa8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF17P17021 662 aa8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 BLVRBP30043 206 aaPredicted RBP8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 RAB31Q13636 194 aa8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 TCEA2Q15560 299 aa8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 IGFBP7Q16270 282 aa8.27□□□□□ -1.09
PTCHD4-201ENST00000339488 LIAT1Q6ZQX7 453 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms