RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SRPXP78539 464 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 ZNF664Q8N3J9 261 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 RAB24Q969Q5 203 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM45BQ96B21 275 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 NOL4LQ96MY1 436 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-201ENST00000338910 MAGT1Q9H0U3 335 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 KLF13Q9Y2Y9 288 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-201ENST00000338910 FRYQ5TBA9 3013 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 IGKV3D-15A0A087WSY6 115 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 KLRC4-KLRK1H3BQV0 150 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 MPPED1O15442 326 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 ZNHIT1O43257 154 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 SPRY1O43609 319 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM50AO95807 157 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 AADACP22760 399 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 PCBD1P61457 104 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 ARF1P84077 181 aaKnown RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 CXorf66Q5JRM2 361 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 ACTR3CQ9C0K3 210 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 DEFB127Q9H1M4 99 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 TCAPO15273 167 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 AMBPP02760 352 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 SNRPCP09234 159 aaKnown RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 FOXG1P55316 489 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-201ENST00000338910 RAB11AP62491 216 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 OR8G1Q15617 311 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 BRICD5Q6PL45 260 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 ABHD14BQ96IU4 210 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 ZNF286AQ9HBT8 521 aa16.04■□□□□ 0.16
PSPC1-201ENST00000338910 PTPRBP23467 1997 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
PSPC1-201ENST00000338910 VAMP2P63027 116 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 ARG2P78540 354 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 BAXQ07812 192 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 TMPRSS7Q7RTY8 843 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM217Q8N7C4 229 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 BEND2Q8NDZ0 799 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 CPEB3Q8NE35 698 aaKnown RBP16.03■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM56Q96MV1 263 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 SPIN2AQ99865 258 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 SPIN2BQ9BPZ2 258 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM56-RWDD3S4R434 201 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 IGKV1-27A0A075B6S5 117 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 OPN1MWP04001 364 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 OPN1MW2P0DN77 364 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 OPN1MW3P0DN78 364 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-201ENST00000338910 HERV-K104P61576 105 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 SLC10A1Q14973 349 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 USF2Q15853 346 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-201ENST00000338910 Q6ZPA2 131 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 OR4X1Q8NH49 305 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 CABLES2Q9BTV7 478 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 ZNF552Q9H707 407 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-201ENST00000338910 GNG13Q9P2W3 67 aa16.03■□□□□ 0.16
PSPC1-201ENST00000338910 MMP7P09237 267 aaPredicted RBP16.02■□□□□ 0.16
PSPC1-201ENST00000338910 SFTPCP11686 197 aa16.02■□□□□ 0.16
PSPC1-201ENST00000338910 CD46P15529 392 aa16.02■□□□□ 0.16
PSPC1-201ENST00000338910 TAS2R30P59541 319 aa16.02■□□□□ 0.16
PSPC1-201ENST00000338910 SPSB1Q96BD6 273 aa16.02■□□□□ 0.16
PSPC1-201ENST00000338910 MRPL37Q9BZE1 423 aaKnown RBP16.02■□□□□ 0.16
PSPC1-201ENST00000338910 AKAP13Q12802 2813 aa16.02■□□□□ 0.16
PSPC1-201ENST00000338910 PPYP01298 95 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 MDKP21741 143 aaPredicted RBP16.02■□□□□ 0.15
PSPC1-201ENST00000338910 NBL1P41271 181 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 NUTF2P61970 127 aaKnown RBP16.02■□□□□ 0.15
PSPC1-201ENST00000338910 ZNF92Q03936 586 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 KRTAP27-1Q3LI81 207 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 ANKRD39Q53RE8 183 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 SDF2L1Q9HCN8 221 aa16.02■□□□□ 0.15
PSPC1-201ENST00000338910 CISD1Q9NZ45 108 aaKnown RBP16.02■□□□□ 0.15
PSPC1-201ENST00000338910 IL18BPO95998 194 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 CCNOP22674 350 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 CCL11P51671 97 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 PIGYQ3MUY2 71 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 ZNF880Q6PDB4 577 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 NAXEQ8NCW5 288 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 ATP5SQ99766 215 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 BOD1L1Q8NFC6 3051 aa16.01■□□□□ 0.15
PSPC1-201ENST00000338910 ADAM20O43506 726 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 HLA-HP01893 362 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 BCL2P10415 239 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 ID3Q02535 119 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 ZNF154Q13106 437 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 RNFT1Q5M7Z0 435 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 ZNF695Q8IW36 515 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 H1FOOQ8IZA3 346 aaPredicted RBP16■□□□□ 0.15
PSPC1-201ENST00000338910 SELENOHQ8IZQ5 122 aaKnown RBP16■□□□□ 0.15
PSPC1-201ENST00000338910 FAM185AQ8N0U4 392 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 OR10A7Q8NGE5 316 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 LRFN3Q9BTN0 628 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 WASF3Q9UPY6 502 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 SPTBN2O15020 2390 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 CLEC18AA5D8T8 446 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 CCL2P13500 99 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 MMP9P14780 707 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 GNRHRP30968 328 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 ZNF766Q5HY98 468 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 ASCL4Q6XD76 172 aa16■□□□□ 0.15
PSPC1-201ENST00000338910 CLEC18CQ8NCF0 446 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms