RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 AWAT1Q58HT5 328 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 TBC1D26Q86UD7 250 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 ZNF573Q86YE8 665 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 Q8IYB0 196 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 H1FOOQ8IZA3 346 aaPredicted RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 TMEM252Q8N6L7 170 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 CPEB3Q8NE35 698 aaKnown RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 OR2M7Q8NG81 312 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 SECTM1Q8WVN6 248 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 POM121L2Q96KW2 1035 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 RAB40CQ96S21 281 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 KCNJ16Q9NPI9 418 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 SLC7A10Q9NS82 523 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 TINAGQ9UJW2 476 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 UBE2J1Q9Y385 318 aaPredicted RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 NKX2-6A6NCS4 301 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 CXorf65A6NEN9 183 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 C5orf52A6NGY3 159 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 BCL3P20749 454 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 NPBWR2P48146 333 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 MEOX2P50222 304 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 PPT1P50897 306 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 RAB2AP61019 212 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 VAMP2P63027 116 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 GNG3P63215 75 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 ZNF616Q08AN1 781 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 ZNF506Q5JVG8 444 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 MCEMP1Q8IX19 187 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 OR11L1Q8NGX0 322 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 MRPL30Q8TCC3 161 aaKnown RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 ABHD3Q8WU67 409 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 FAM216AQ8WUB2 273 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 NANOS1Q8WY41 292 aaKnown RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 PSMG3Q9BT73 122 aaPredicted RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 SMIM3Q9BZL3 60 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 FGF23Q9GZV9 251 aaPredicted RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 ESRP2Q9H6T0 727 aaKnown RBP9.16□□□□□ -0.94
RTN3-201ENST00000338850 ZNF581Q9P0T4 197 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 OR2W1Q9Y3N9 320 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 WSB1Q9Y6I7 421 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 FBN2P35556 2912 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 PCNX1Q96RV3 2341 aa9.16□□□□□ -0.94
RTN3-201ENST00000338850 IGSF23A1L1A6 192 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 J3QT63 122 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 TRAPPC6AO75865 159 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 F12P00748 615 aaPredicted RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 PRH1P02810 166 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 F2RP25116 425 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 NFYBP25208 207 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 PLP2Q04941 152 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 HERPUD1Q15011 391 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 KHDC3LQ587J8 217 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 DMRTC1Q5HYR2 192 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 ZNF818PQ6ZRF7 136 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 NUFIP2Q7Z417 695 aaKnown RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 LILRB1Q8NHL6 650 aaPredicted RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 PLPPR1Q8TBJ4 325 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 DYRK2Q92630 601 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 APH1AQ96BI3 265 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 BSCL2Q96G97 398 aaPredicted RBP9.15□□□□□ -0.94
RTN3-201ENST00000338850 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 HIST1H2AAQ96QV6 131 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 ATP5SQ99766 215 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 TOLLIPQ9H0E2 274 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 SIRT7Q9NRC8 400 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 RNF115Q9Y4L5 304 aa9.15□□□□□ -0.94
RTN3-201ENST00000338850 PKDREJQ9NTG1 2253 aa9.15□□□□□ -0.95
RTN3-201ENST00000338850 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.95
RTN3-201ENST00000338850 PINLYPA6NC86 204 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 ANKRD30BLA7E2S9 258 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 CD300LBA8K4G0 201 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 B4DEV8 164 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 ZNHIT1O43257 154 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 TGOLN2O43493 480 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 IGHV2-5P01817 119 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 ZNF44P15621 663 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 HAAOP46952 286 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 SULT1A1P50225 295 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 B2MP61769 119 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 NHLH2Q02577 135 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 TLE4Q04727 773 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 CDSNQ15517 529 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 STX12Q86Y82 276 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 ZBTB34Q8NCN2 500 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 C14orf79Q96F83 325 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 ZNF845Q96IR2 970 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms