RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 OR10V1Q8NGI7 309 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 OR10X1Q8NGY0 326 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 OR56B4Q8NH76 319 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
PRKN-201ENST00000338468 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 SLC25A33Q9BSK2 321 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 PRSS22Q9GZN4 317 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 STEAP1Q9UHE8 339 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 TMEM272A0A1B0GTI8 110 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 OR2F2O95006 317 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 SNRNP70P08621 437 aaKnown RBP12.17□□□□□ -0.46
PRKN-201ENST00000338468 MNDAP41218 407 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 RAB7AP51149 207 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 PSMD7P51665 324 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
PRKN-201ENST00000338468 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 TMEM95Q3KNT9 176 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 THNSL2Q86YJ6 484 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 OR8H3Q8N146 312 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 CAPSLQ8WWF8 208 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
PRKN-201ENST00000338468 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 MMP27Q9H306 513 aa12.17□□□□□ -0.46
PRKN-201ENST00000338468 SH2D7A6NKC9 451 aaPredicted RBP12.16□□□□□ -0.46
PRKN-201ENST00000338468 IFITM5A6NNB3 132 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 M0QZ24 198 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 HSD17B6O14756 317 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 VSIG10L2P0DP72 767 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 FGF9P31371 208 aaPredicted RBP12.16□□□□□ -0.46
PRKN-201ENST00000338468 REG1BP48304 166 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 VEGFCP49767 419 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 ZNF137PP52743 207 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 HMGN3Q15651 99 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 MORN2Q502X0 79 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 OR52L2PQ8NGH6 319 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
PRKN-201ENST00000338468 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
PRKN-201ENST00000338468 GNG12Q9UBI6 72 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 AK3Q9UIJ7 227 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 HSF4Q9ULV5 492 aa12.16□□□□□ -0.46
PRKN-201ENST00000338468 TRBV6-6A0A0A6YYG2 114 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 A0A0B4J203 849 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 PDCD5O14737 125 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 FAM106CPP0CH98 169 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 RAB3BP20337 219 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 MYL9P24844 172 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 HTD2P86397 168 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 MOGAT2Q3SYC2 334 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 C11orf44Q8N8P7 122 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 RTN4IP1Q8WWV3 396 aaPredicted RBP12.15□□□□□ -0.46
PRKN-201ENST00000338468 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
PRKN-201ENST00000338468 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 PECRQ9BY49 303 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 OR2S2Q9NQN1 319 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 KCNIP1Q9NZI2 227 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 STUB1Q9UNE7 303 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
PRKN-201ENST00000338468 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 TSPAN15O95858 294 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
PRKN-201ENST00000338468 PPP1CCP36873 323 aaKnown RBP12.14□□□□□ -0.47
PRKN-201ENST00000338468 EBI3Q14213 229 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 ABCA11PQ4W5N1 156 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 ODF3L1Q8IXM7 274 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 AKR1E2Q96JD6 320 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 OR51E2Q9H255 320 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 JPT1Q9UK76 154 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 RAB22AQ9UL26 194 aa12.14□□□□□ -0.47
PRKN-201ENST00000338468 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
PRKN-201ENST00000338468 YPEL1O60688 119 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 SLC2A2P11168 524 aaPredicted RBP12.13□□□□□ -0.47
PRKN-201ENST00000338468 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
PRKN-201ENST00000338468 HNF4GQ14541 408 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 Q6ZTK2 550 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 Q8N6K4 173 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 GALMQ96C23 342 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 YPEL2Q96QA6 119 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 RNF167Q9H6Y7 350 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 CHMP1AQ9HD42 196 aaPredicted RBP12.13□□□□□ -0.47
PRKN-201ENST00000338468 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
PRKN-201ENST00000338468 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms