RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OSGIN2Q9Y236 505 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 U3KQA8 63 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 SHANK1Q9Y566 2161 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 SUB1P53999 127 aaKnown RBP eCLIP5.4□□□□□ -1.546e-7■■□□□ 12.2
PRKDC-202ENST00000338368 TMPRSS3P57727 454 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 HES1Q14469 280 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 C2orf68Q2NKX9 166 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 LRRC10Q5BKY1 277 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 PET117Q6UWS5 81 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 MOB3AQ96BX8 217 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 R3HDM4Q96D70 268 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 C14orf79Q96F83 325 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 TUBG2Q9NRH3 451 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 TGOLN2O43493 480 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 CRYGSP22914 178 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 RAB7AP51149 207 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 MRPS11P82912 194 aaKnown RBP5.4□□□□□ -1.54
PRKDC-202ENST00000338368 HTD2P86397 168 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 VWA1Q6PCB0 445 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 HIST2H3AQ71DI3 136 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 GPR37O15354 613 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A27PA6NNH2 459 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 NHLRC3Q5JS37 347 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM252Q8N6L7 170 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 SLC35E1Q96K37 410 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PKDREJQ9NTG1 2253 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 COL10A1Q03692 680 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 WDYHV1Q96HA8 205 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 LPAR3Q9UBY5 353 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 WSB1Q9Y6I7 421 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 CREBBPQ92793 2442 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 HRASP01112 189 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 CD8AP01732 235 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 DYNLT3P51808 116 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 GFRA1P56159 465 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 MRGPRFQ96AM1 343 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 OR2B8PP59922 312 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 ERHP84090 104 aaKnown RBP5.4□□□□□ -1.55
PRKDC-202ENST00000338368 S100PBPQ96BU1 408 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 RPUSD4Q96CM3 377 aaKnown RBP5.4□□□□□ -1.55
PRKDC-202ENST00000338368 MTCH1Q9NZJ7 389 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PPIAL4EA0A075B759 164 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PPIAL4DF5H284 164 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PPIAL4FP0DN26 164 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PSG7Q13046 419 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 KRTCAP3Q53RY4 240 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 ETV3LQ6ZN32 361 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 PPIAL4AQ9Y536 164 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 NPTNQ9Y639 398 aa5.4□□□□□ -1.55
PRKDC-202ENST00000338368 CEACAM1P13688 526 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 SPINK9Q5DT21 86 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 AQP10Q96PS8 301 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 SSX3Q99909 188 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 C1QTNF5Q9BXJ0 243 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 LRRK1Q38SD2 2015 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CRYM-AS1A6NIL9 109 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 MGST3O14880 152 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TMPRSS2O15393 492 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TXNL1O43396 289 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 HIST3H3Q16695 136 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 RNF144BQ7Z419 303 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 GAL3ST2Q9H3Q3 398 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 C2orf16Q68DN1 1984 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ACOT6Q3I5F7 207 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 FAM166AQ6J272 317 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 BTNL3Q6UXE8 466 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ETV2O00321 342 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 MPV17P39210 176 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CCL8P80075 99 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF818PQ6ZRF7 136 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 SMIM7Q9BQ49 75 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 PARP11Q9NR21 331 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CDRT15L2A8MXV6 281 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 H7BYZ3 331 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 HKR1P10072 659 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 KIAA0141Q14154 515 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 HFEQ30201 348 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF429Q86V71 674 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 C5orf63A6NC05 138 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 IFNL4K9M1U5 179 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 DEDDO75618 318 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 USF2Q15853 346 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 BCL2L2Q92843 193 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 RCC2Q9P258 522 aaKnown RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF735P0CB33 412 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ASCL5Q7RTU5 278 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 DUXBA0A1W2PPF3 345 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CDX4O14627 284 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CA5BP1Q8WTZ4 195 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TVP23CQ96ET8 276 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TREM2Q9NZC2 230 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 K7EQM0 130 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 CD200P41217 278 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 B3GALT5-AS1P59052 145 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 SELENOHQ8IZQ5 122 aaKnown RBP5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TRAV38-1A0A0B4J264 116 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 DEFA6Q01524 100 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM230Q96A57 120 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms