RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RSRP1Q9BUV0 290 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 PARP12Q9H0J9 701 aaKnown RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 CALYQ9NYX4 217 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 MGAT4CQ9UBM8 478 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 OPN4Q9UHM6 478 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 OVOL3O00110 214 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 HSD17B6O14756 317 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 SULT1A3P0DMM9 295 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 SULT1A4P0DMN0 295 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 CD34P28906 385 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 PPP1CCP36873 323 aaKnown RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 LUMP51884 338 aaPredicted RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 SGPP2Q8IWX5 399 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 FYTTD1Q96QD9 318 aaKnown RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 CCL19Q99731 98 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 CCL28Q9NRJ3 127 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 SLC2A9Q9NRM0 540 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 TACC2O95359 2948 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 hADV38S2A0JD32 116 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 SFT2D2O95562 160 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 FSTL3O95633 263 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 OR8U9P0C7N5 309 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 TMEM33P57088 247 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
CBX3-201ENST00000337620 ZNF818PQ6ZRF7 136 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 LDLRAD3Q86YD5 345 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 OR2AK2Q8NG84 335 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 RTN4IP1Q8WWV3 396 aaPredicted RBP12.16□□□□□ -0.46
CBX3-201ENST00000337620 DMRTB1Q96MA1 342 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 PHB2Q99623 299 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 C19orf12Q9NSK7 152 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 CLEC18AA5D8T8 446 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
CBX3-201ENST00000337620 CGB3P0DN86 165 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 CGB7P0DN87 165 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 RPS2P15880 293 aaKnown RBP12.16□□□□□ -0.46
CBX3-201ENST00000337620 HTD2P86397 168 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 C17orf58Q2M2W7 97 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 C2orf68Q2NKX9 166 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
CBX3-201ENST00000337620 PRR13Q9NZ81 148 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 GNG12Q9UBI6 72 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
CBX3-201ENST00000337620 CRYM-AS1A6NIL9 109 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 GPR31O00270 319 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 GOSR2O14653 212 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 COL8A1P27658 744 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 MEF2CQ06413 473 aaPredicted RBP12.15□□□□□ -0.46
CBX3-201ENST00000337620 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 CCDC71LQ8N9Z2 235 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 CORO2AQ92828 525 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 KCNS2Q9ULS6 477 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 DSCAML1Q8TD84 2053 aa12.15□□□□□ -0.46
CBX3-201ENST00000337620 TENM4Q6N022 2769 aa12.15□□□□□ -0.47
CBX3-201ENST00000337620 SLC22A5O76082 557 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 IFNA2P01563 188 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 CMTM1Q8IZ96 169 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 FAM185AQ8N0U4 392 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 GPHA2Q96T91 129 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 CHIAQ9BZP6 476 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 MIOXQ9UGB7 285 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
CBX3-201ENST00000337620 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
CBX3-201ENST00000337620 F2RL2O00254 374 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 TNFSF12O43508 249 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 SIX6O95475 246 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 IGHV3-7P01780 117 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
CBX3-201ENST00000337620 ZNF273Q14593 569 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 TMEM200BQ69YZ2 307 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 ZNF436Q9C0F3 470 aaPredicted RBP12.14□□□□□ -0.47
CBX3-201ENST00000337620 NAA60Q9H7X0 242 aa12.14□□□□□ -0.47
CBX3-201ENST00000337620 MPPED1O15442 326 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 ANXA3P12429 323 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 NFYBP25208 207 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 SP6Q3SY56 376 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 NLRC3Q7RTR2 1065 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 OR8B3Q8NGG8 313 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 COQ8AQ8NI60 647 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 IGFBPL1Q8WX77 278 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms