RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MELTFP08582 738 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 VOPP1Q96AW1 172 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 NPSP0C0P6 89 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 GZMBP10144 247 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 CD27P26842 260 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 ARTNQ5T4W7 220 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 SCN8AQ9UQD0 1980 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 PIAS2O75928 621 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 IGHV3-13P01766 116 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 IGHV3-7P01780 117 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 COX5BP10606 129 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 IRF2P14316 349 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 ZNF32P17041 273 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 BRS3P32247 399 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 UBE2G1P62253 170 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 SUPT4H1P63272 117 aaKnown RBP11.51□□□□□ -0.57
COL2A1-201ENST00000337299 CEACAM16Q2WEN9 425 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 SPATA46Q5T0L3 261 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 DEFB123Q8N688 67 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
COL2A1-201ENST00000337299 PLCE1Q9P212 2302 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 SCRG1O75711 98 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 PAFAH1B2P68402 229 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 MMDQ15546 238 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 FHL5Q5TD97 284 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 WBP1Q96G27 269 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 HS3ST3A1Q9Y663 406 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 A0A087WWC5 75 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 A0A1B0GX78 115 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 CXCL13O43927 109 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 LYPD3O95274 346 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 PAQR4Q8N4S7 273 aaPredicted RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 OR10G3Q8NGC4 313 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 OR1F12Q8NHA8 337 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 OR6C1Q96RD1 312 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 SNHG12Q9BXW3 62 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 MRPL18Q9H0U6 180 aaKnown RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 CLN8Q9UBY8 286 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 ROS1P08922 2347 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 CEACAM6P40199 344 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 DUSP3P51452 185 aaPredicted RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 OR2V1Q8NHB1 315 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 CLDND2Q8NHS1 167 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
COL2A1-201ENST00000337299 MRGPRX4Q96LA9 322 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 TMEM147Q9BVK8 224 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 TMEM222Q9H0R3 208 aa11.5□□□□□ -0.57
COL2A1-201ENST00000337299 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 A0A1W2PPC4 97 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 A8MWP6 167 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 ISG15P05161 165 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 SCTP09683 121 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 UQCRFS1P47985 274 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 C1QL4Q86Z23 238 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 OR8I2Q8N0Y5 310 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 ALKBH7Q9BT30 221 aaPredicted RBP11.49□□□□□ -0.57
COL2A1-201ENST00000337299 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 R4GN57 208 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 CXorf51AA0A1B0GTR3 108 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 DEFB108AA8MXU0 73 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 SRFP11831 508 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 SLC35E1Q96K37 410 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 SDF2L1Q9HCN8 221 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 TRBV6-7A0A0A0MS04 114 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 K7EQS6 105 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 K7N7A8 449 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 TNFSF11O14788 317 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 KBTBD11O94819 623 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 NUBP1P53384 320 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 FDX2Q6P4F2 183 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 LRRC75AQ8NAA5 344 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 OR10S1Q8NGN2 331 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 CISD1Q9NZ45 108 aaKnown RBP11.49□□□□□ -0.57
COL2A1-201ENST00000337299 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
COL2A1-201ENST00000337299 IGKV1D-43A0A0B4J1Z2 117 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 ZDHHC23Q8IYP9 409 aa11.49□□□□□ -0.57
COL2A1-201ENST00000337299 POLEQ07864 2286 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 PTPRDP23468 1912 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.48□□□□□ -0.57
COL2A1-201ENST00000337299 SHISA7A6NL88 538 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 SPINT1O43278 529 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
COL2A1-201ENST00000337299 PRDX4Q13162 271 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 CALHM1Q8IU99 346 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 ABHD5Q8WTS1 349 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
COL2A1-201ENST00000337299 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms