RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 OR2F1Q13607 317 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 C1orf185Q5T7R7 199 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 DUX4L9Q6RFH8 374 aaPredicted RBP10.62□□□□□ -0.71
LIMK1-201ENST00000336180 C11orf53Q8IXP5 236 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 PDZD9Q8IXQ8 264 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 TAF9BQ9HBM6 251 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 DUX4Q9UBX2 424 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 ADAM20O43506 726 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 CA11O75493 328 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 GLIPR1P48060 266 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 PRSS54Q6PEW0 395 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 PCSK4Q6UW60 755 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 BTNL3Q6UXE8 466 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 OR10J5Q8NHC4 309 aa10.62□□□□□ -0.71
LIMK1-201ENST00000336180 MSI2Q96DH6 328 aaKnown RBP10.62□□□□□ -0.71
LIMK1-201ENST00000336180 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 LRP5LA4QPB2 252 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 SSTR5P35346 364 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 NAAAQ02083 359 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 CLINT1Q14677 625 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 EIF2S3LQ2VIR3 472 aaKnown RBP10.61□□□□□ -0.71
LIMK1-201ENST00000336180 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 FGFRL1Q8N441 504 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 OR8G5Q8NG78 346 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 LRRC29Q8WV35 223 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 FAM234AQ9H0X4 552 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 RCC2Q9P258 522 aaKnown RBP10.61□□□□□ -0.71
LIMK1-201ENST00000336180 ATP23Q9Y6H3 246 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
LIMK1-201ENST00000336180 FBP1P09467 338 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 PMELP40967 661 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
LIMK1-201ENST00000336180 MPV17LQ2QL34 196 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 PIK3IP1Q96FE7 263 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 CNTNAP3BQ96NU0 1288 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 NRIP2Q9BQI9 281 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 REG4Q9BYZ8 158 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 CNTNAP3Q9BZ76 1288 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 CYTL1Q9NRR1 136 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 FBXL17Q9UF56 701 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 RCL1Q9Y2P8 373 aaKnown RBP10.61□□□□□ -0.71
LIMK1-201ENST00000336180 SLC25A15Q9Y619 301 aa10.61□□□□□ -0.71
LIMK1-201ENST00000336180 IQCF6A8MYZ5 107 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 K7EPK0 472 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 SSSCA1O60232 199 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 C1QL1O75973 258 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 SMIM6P0DI80 62 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 PGA5P0DJD9 388 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 HKR1P10072 659 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 PSG2P11465 335 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 CEACAM6P40199 344 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 CAV2P51636 162 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ZNF718Q3SXZ3 478 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 UTF1Q5T230 341 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 MOGAT3Q86VF5 341 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ZFP82Q8N141 532 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 RNASE11Q8TAA1 199 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 LEAP2Q969E1 77 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ZDHHC8Q9ULC8 765 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 FAM24AA6NFZ4 105 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 WDR82Q6UXN9 313 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 GFRALQ6UXV0 394 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 Q8NA96 180 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 HRH4Q9H3N8 390 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 TAS2R3Q9NYW6 316 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 RAXQ9Y2V3 346 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 CSMD1Q96PZ7 3565 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 DOCK11Q5JSL3 2073 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ABCD4O14678 606 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 PPP1CCP36873 323 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 FHITP49789 147 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ERVFRD-1P60508 538 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 COL10A1Q03692 680 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 SRSF4Q08170 494 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 DOLPP1Q86YN1 238 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 HSD17B11Q8NBQ5 300 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 ZNRF1Q8ND25 227 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 SNRNP40Q96DI7 357 aaKnown RBP10.6□□□□□ -0.71
LIMK1-201ENST00000336180 GPR61Q9BZJ8 451 aa10.6□□□□□ -0.71
LIMK1-201ENST00000336180 A0A1W2PPE3 182 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 CST7O76096 145 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 TMEM33P57088 247 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 HLA-DRB3P79483 266 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 CYCSP99999 105 aaKnown RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 RSRP1Q9BUV0 290 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms