RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 FSHBP01225 129 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 IGHV3-43DP0DP04 118 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 CD34P28906 385 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 GNMTQ14749 295 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 PYDC2Q56P42 97 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 SUCNR1Q9BXA5 334 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 TMEM133Q9H2Q1 129 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 IFT46Q9NQC8 304 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 GFOD1Q9NXC2 390 aa14.28□□□□□ -0.12
CHGA-202ENST00000334654 CENPVL3A0A0U1RRI6 287 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 FAM172BPA6NC97 362 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 A8MV72 311 aaPredicted RBP14.27□□□□□ -0.12
CHGA-202ENST00000334654 SDCBPO00560 298 aaPredicted RBP14.27□□□□□ -0.12
CHGA-202ENST00000334654 RBBP9O75884 186 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 NFYBP25208 207 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 RCVRNP35243 200 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 CLEC9AQ6UXN8 241 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 Q8N402 240 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 IL1F10Q8WWZ1 152 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 LEAP2Q969E1 77 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 TRIM63Q969Q1 353 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 OR1A1Q9P1Q5 309 aa14.27□□□□□ -0.12
CHGA-202ENST00000334654 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.12
CHGA-202ENST00000334654 NAV3Q8IVL0 2385 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 TRBV6-7A0A0A0MS04 114 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 DIRAS3O95661 229 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 IGHV3-7P01780 117 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 SSBP1Q04837 148 aaKnown RBP14.26□□□□□ -0.13
CHGA-202ENST00000334654 BAK1Q16611 211 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 TMEM30BQ3MIR4 351 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 MORN2Q502X0 79 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 ZNF439Q8NDP4 499 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 OR5AP2Q8NGF4 316 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 LHX4Q969G2 390 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 THAP7Q9BT49 309 aaPredicted RBP14.26□□□□□ -0.13
CHGA-202ENST00000334654 TOLLIPQ9H0E2 274 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 HEXA-AS1Q9H8Q6 139 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 RAB9BQ9NP90 201 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 OR2S2Q9NQN1 319 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 PSG11Q9UQ72 335 aa14.26□□□□□ -0.13
CHGA-202ENST00000334654 ANK3Q12955 4377 aaKnown RBP14.26□□□□□ -0.13
CHGA-202ENST00000334654 IGHV2-26A0A0B4J1V2 119 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 UPK1BO75841 260 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 IGHV4-38-2P0DP08 117 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 HLA-DMAP28067 261 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 PPP1CCP36873 323 aaKnown RBP14.25□□□□□ -0.13
CHGA-202ENST00000334654 ZNF134P52741 427 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ABHD12Q8N2K0 398 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 PNKDQ8N490 385 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 OR11H6Q8NGC7 330 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 OR10V1Q8NGI7 309 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 PARP12Q9H0J9 701 aaKnown RBP14.25□□□□□ -0.13
CHGA-202ENST00000334654 TMEM160Q9NX00 188 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 SLC23A1Q9UHI7 598 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 JPT1Q9UK76 154 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 BET1O15155 118 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 YPEL1O60688 119 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 IGLV1-47P01700 117 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 UBE2E1P51965 193 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ACTBP60709 375 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ACTG1P63261 375 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 LY6G6FQ5SQ64 297 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 FAM120AOSQ5T036 256 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 STEAP3Q658P3 488 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 NCR3LG1Q68D85 454 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 PDZD9Q8IXQ8 264 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ZNF596Q8TC21 504 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 YPEL2Q96QA6 119 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ZNRD1Q9P1U0 126 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
CHGA-202ENST00000334654 ZNF107Q9UII5 783 aaPredicted RBP14.25□□□□□ -0.13
CHGA-202ENST00000334654 FN1P02751 2386 aaKnown RBP14.24□□□□□ -0.13
CHGA-202ENST00000334654 TRAV40A0A0B4J280 105 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 ANKRD20A5PA0PJZ0 165 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 ODF3BA8MYP8 253 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 SLC31A2O15432 143 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CD74P04233 296 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CD3DP04234 171 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 ZBTB25P24278 435 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 COX7A1P24310 79 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CEACAM6P40199 344 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 RFX2P48378 723 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 Q3ZCU0 254 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CT45A1Q5HYN5 189 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 LDLRAD2Q5SZI1 272 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 ZNF626Q68DY1 528 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 Q71RC1 249 aaPredicted RBP14.24□□□□□ -0.13
CHGA-202ENST00000334654 OVCH2Q7RTZ1 564 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 TMEM229BQ8NBD8 167 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 MINDY2Q8NBR6 621 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 OR13D1Q8NGV5 346 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CT45A3Q8NHU0 189 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 AJUBAQ96IF1 538 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 CLEC7AQ9BXN2 247 aa14.24□□□□□ -0.13
CHGA-202ENST00000334654 IGHV3OR16-10A0A075B7F0 116 aa14.23□□□□□ -0.13
CHGA-202ENST00000334654 A0A1W2PPE3 182 aa14.23□□□□□ -0.13
CHGA-202ENST00000334654 J3QR06 171 aa14.23□□□□□ -0.13
CHGA-202ENST00000334654 J3QRK9 145 aa14.23□□□□□ -0.13
CHGA-202ENST00000334654 PMP2P02689 132 aa14.23□□□□□ -0.13
CHGA-202ENST00000334654 CTXN2P0C2S0 81 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms