RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 NCR3LG1Q68D85 454 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 ABHD3Q8WU67 409 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 PRDM14Q9GZV8 571 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 C3orf80F5H4A9 247 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 AMBPP02760 352 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 JOSD1Q15040 202 aaPredicted RBP20.12■□□□□ 0.81
TSKU-201ENST00000333090 C16orf82Q7Z2V1 217 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 CLDN23Q96B33 292 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 PSMG3Q9BT73 122 aaPredicted RBP20.12■□□□□ 0.81
TSKU-201ENST00000333090 LAMP3Q9UQV4 416 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 MRPS17Q9Y2R5 130 aaKnown RBP20.12■□□□□ 0.81
TSKU-201ENST00000333090 GZMBP10144 247 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 HAPLN4Q86UW8 402 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 MKXQ8IYA7 352 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 OR1K1Q8NGR3 316 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 MRPL30Q8TCC3 161 aaKnown RBP20.11■□□□□ 0.81
TSKU-201ENST00000333090 ZNF488Q96MN9 340 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 SRD5A3Q9H8P0 318 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 CD300LBA8K4G0 201 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 SYNGR1O43759 233 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 ZNF737O75373 536 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 IFNA1P01562 189 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 SELLP14151 372 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 Q3ZCU0 254 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 RIPPLY2Q5TAB7 128 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 WDR54Q9H977 334 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 K7ESF4 209 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 TRAPPC6AO75865 159 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 FOSL1P15407 271 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 HBG1P69891 147 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 HBG2P69892 147 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 CLEC12BQ2HXU8 276 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 LRRC75BQ2VPJ9 315 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 ZNF324BQ6AW86 544 aaPredicted RBP20.11■□□□□ 0.81
TSKU-201ENST00000333090 ZDHHC23Q8IYP9 409 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 NAT8Q9UHE5 227 aa20.11■□□□□ 0.81
TSKU-201ENST00000333090 IGKV1-39P01597 117 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 IGKV1D-39P04432 117 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 SLC25A6P12236 298 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 FGF7P21781 194 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 PLA2G5P39877 138 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 TAS2R60P59551 318 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 ERVS71-1P61550 626 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 SERF2P84101 59 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 TMEM41BQ5BJD5 291 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 SPEM1Q8N4L4 309 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 PSMF1Q92530 271 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 LHX4Q969G2 390 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 RPUSD4Q96CM3 377 aaKnown RBP20.1■□□□□ 0.81
TSKU-201ENST00000333090 REPIN1Q9BWE0 567 aaKnown RBP20.1■□□□□ 0.81
TSKU-201ENST00000333090 FRYQ5TBA9 3013 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 LY6G6EA0A0G2JKS1 128 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 DVL1O14640 695 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 RFPL3SP0C7P2 107 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 ZNF16P17020 682 aaPredicted RBP20.1■□□□□ 0.81
TSKU-201ENST00000333090 SRD5A2P31213 254 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 SPANXN5Q5MJ07 72 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 MRPL21Q7Z2W9 205 aaKnown RBP20.1■□□□□ 0.81
TSKU-201ENST00000333090 OR1P1Q8NH06 330 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 MISP3Q96FF7 219 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 U3KQA8 63 aa20.1■□□□□ 0.81
TSKU-201ENST00000333090 FREM1Q5H8C1 2179 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 A0A096LPE4 126 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 A0A1W2PPZ6 126 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 HMGB3O15347 200 aaKnown RBP20.09■□□□□ 0.81
TSKU-201ENST00000333090 ST8SIA5O15466 376 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 CEACAM21Q3KPI0 293 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 ZNF845Q96IR2 970 aaPredicted RBP20.09■□□□□ 0.81
TSKU-201ENST00000333090 OR4C12Q96R67 309 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 PRSS50Q9UI38 385 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 CXCL12P48061 93 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 TMEM241Q24JQ0 296 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 WIPI1Q5MNZ9 446 aaPredicted RBP20.09■□□□□ 0.81
TSKU-201ENST00000333090 COLCA1Q6ZS62 124 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 SAXO1Q8IYX7 474 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 PRR18Q8N4B5 295 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 KCNE4Q8WWG9 221 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 HIST1H2AAQ96QV6 131 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 SLC39A9Q9NUM3 307 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 OR1A1Q9P1Q5 309 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 PPP1R3CQ9UQK1 317 aa20.09■□□□□ 0.81
TSKU-201ENST00000333090 UBE2L5PA0A1B0GUS4 154 aa20.08■□□□□ 0.81
TSKU-201ENST00000333090 XKRY2A2RUG3 117 aa20.08■□□□□ 0.81
TSKU-201ENST00000333090 C5orf49A4QMS7 147 aa20.08■□□□□ 0.81
TSKU-201ENST00000333090 PFN1P07737 140 aaKnown RBP20.08■□□□□ 0.81
TSKU-201ENST00000333090 USF2Q15853 346 aaPredicted RBP20.08■□□□□ 0.81
TSKU-201ENST00000333090 ABLIM2Q6H8Q1 611 aa20.08■□□□□ 0.81
TSKU-201ENST00000333090 WDR61Q9GZS3 305 aaKnown RBP20.08■□□□□ 0.81
TSKU-201ENST00000333090 ZNF705GA8MUZ8 300 aaPredicted RBP20.08■□□□□ 0.8
TSKU-201ENST00000333090 MLF1P58340 268 aa20.08■□□□□ 0.8
TSKU-201ENST00000333090 CYP2G1PQ6ZSU1 146 aa20.08■□□□□ 0.8
TSKU-201ENST00000333090 ZNF552Q9H707 407 aaPredicted RBP20.08■□□□□ 0.8
TSKU-201ENST00000333090 DIDO1Q9BTC0 2240 aaKnown RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 TRAV39A0A0B4J263 110 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 KLF7O75840 302 aaPredicted RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 IGKV1-5P01602 117 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 CYC1P08574 325 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 MEF2BQ02080 365 aaPredicted RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 P2RY6Q15077 328 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 BSXQ3C1V8 233 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms