RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZNF718Q3SXZ3 478 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 Q6ZR03 302 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 Q6ZS92 163 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 UBALD1Q8TB05 177 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 ABHD14BQ96IU4 210 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 PARP11Q9NR21 331 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 FAM96BQ9Y3D0 163 aa14.68□□□□□ -0.06
DDX28-201ENST00000332395 DSPP15924 2871 aaKnown RBP14.68□□□□□ -0.06
DDX28-201ENST00000332395 A6NLC8 198 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 C1QTNF9BB2RNN3 333 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 SSSCA1O60232 199 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 PSPNO60542 156 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 IGLV2-14P01704 120 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 PAX6P26367 422 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 GCH1P30793 250 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 CAV2P51636 162 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 SNRPEP62304 92 aaKnown RBP14.67□□□□□ -0.06
DDX28-201ENST00000332395 HMGN3Q15651 99 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 BEND4Q6ZU67 534 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 GINS3Q9BRX5 216 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 MAGT1Q9H0U3 335 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 MSL2Q9HCI7 577 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 BOD1L1Q8NFC6 3051 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 GTF3C1Q12789 2109 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 FAM24AA6NFZ4 105 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 S100A8P05109 93 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 SEC11BP0C7V7 166 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 PRAMEF6Q5VXH4 476 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 Q6ZRG5 221 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 EGLN1Q9GZT9 426 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 FAM212BQ9NTI7 297 aaPredicted RBP14.67□□□□□ -0.06
DDX28-201ENST00000332395 SVILO95425 2214 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 LAMA5O15230 3695 aa14.67□□□□□ -0.06
DDX28-201ENST00000332395 SERPINE2P07093 398 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 FABP1P07148 127 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 WNT2P09544 360 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 PSG2P11465 335 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 LMO1P25800 156 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 HOXA4Q00056 320 aaPredicted RBP14.66□□□□□ -0.06
DDX28-201ENST00000332395 ID3Q02535 119 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 MBNL2Q5VZF2 373 aaKnown RBP14.66□□□□□ -0.06
DDX28-201ENST00000332395 BTNL8Q6UX41 500 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 WDR82Q6UXN9 313 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 SLC25A15Q9Y619 301 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 IGSF23A1L1A6 192 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 NBL1P41271 181 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 F2RL1P55085 397 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 ACP7Q6ZNF0 438 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 FAM169BQ8N8A8 192 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 ZNF251Q9BRH9 671 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 SMCO4Q9NRQ5 59 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 LYRM2Q9NU23 88 aaPredicted RBP14.66□□□□□ -0.06
DDX28-201ENST00000332395 UFSP2Q9NUQ7 469 aa14.66□□□□□ -0.06
DDX28-201ENST00000332395 RBM7Q9Y580 266 aaKnown RBP14.66□□□□□ -0.06
DDX28-201ENST00000332395 PIGBOS1A0A0B4J2F0 54 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 TMEM30CPA0ZSE6 113 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 C5orf52A6NGY3 159 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 RNASEK-C17orf49H0YIS7 233 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 KLK10O43240 276 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 SFTA3P0C7M3 94 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 PTAFRP25105 342 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 CEACAM6P40199 344 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 ASCL1P50553 236 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 VAMP2P63027 116 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 RIF1Q5UIP0 2472 aaKnown RBP14.65□□□□□ -0.06
DDX28-201ENST00000332395 C15orf54Q8N8G6 183 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 AKR1E2Q96JD6 320 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 PARP12Q9H0J9 701 aaKnown RBP14.65□□□□□ -0.06
DDX28-201ENST00000332395 PLEKHF2Q9H8W4 249 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 KCNS2Q9ULS6 477 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 PPP1R3CQ9UQK1 317 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 FAM215AQ9Y5M1 114 aa14.65□□□□□ -0.06
DDX28-201ENST00000332395 ZFHX2Q9C0A1 2572 aaPredicted RBP14.64□□□□□ -0.07
DDX28-201ENST00000332395 A0A0G2JRQ6 117 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 PROB1E7EW31 1015 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 UBE2CO00762 179 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 NXPH3O95157 252 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 ID4P47928 161 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 SLC16A13Q7RTY0 426 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 C1orf174Q8IYL3 243 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 RPRMLQ8N4K4 120 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 K7EM74 188 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 S100A9P06702 114 aaKnown RBP14.64□□□□□ -0.07
DDX28-201ENST00000332395 OR8U9P0C7N5 309 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 DANCRP0C864 163 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 TMEM252Q8N6L7 170 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 RBMXL3Q8N7X1 1067 aaKnown RBP14.64□□□□□ -0.07
DDX28-201ENST00000332395 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 OR8U1Q8NH10 309 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 SLC25A31Q9H0C2 315 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 SH3BGRL3Q9H299 93 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 GSN-AS1Q9NRJ2 163 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 KCNIP1Q9NZI2 227 aa14.64□□□□□ -0.07
DDX28-201ENST00000332395 C1orf196B1AJZ1 125 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 TMEM50AO95807 157 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 CD5P06127 495 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 MMP9P14780 707 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 EPHA1P21709 976 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 RBMS3Q6XE24 437 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms