RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 OR5C1Q8NGR4 320 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 STARD4Q96DR4 205 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 A0A1B0GV50 99 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 WRBO00258 174 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 PITX3O75364 302 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 Q6ZRM9 215 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 ABHD14BQ96IU4 210 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 HES4Q9HCC6 221 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 C19orf12Q9NSK7 152 aa12.53□□□□□ -0.4
CLCNKA-201ENST00000331433 ZNF891A8MT65 544 aaPredicted RBP12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 H3BP45 60 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 TOR1AO14656 332 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 SNAPINO95295 136 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 DYNLT3P51808 116 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 DVL1P1P54792 670 aaPredicted RBP12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 HMGN3Q15651 99 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 ALKBH2Q6NS38 261 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 WIPI2Q9Y4P8 454 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 USF3Q68DE3 2245 aa12.52□□□□□ -0.4
CLCNKA-201ENST00000331433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 AHRRA9YTQ3 701 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 CEACAM4O75871 244 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 HEXAP06865 529 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 ATP6V0CP27449 155 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 SNCAP37840 140 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 PAX9P55771 341 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF266Q14584 549 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 OR1L1Q8NH94 360 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 AKR1E2Q96JD6 320 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF71Q9NQZ8 489 aaPredicted RBP12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 PROCRQ9UNN8 238 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 SPTBN2O15020 2390 aa12.52□□□□□ -0.41
CLCNKA-201ENST00000331433 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 IGHV2OR16-5A0A0B4J2B6 119 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 NFYBP25208 207 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 PPT1P50897 306 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 AESQ08117 197 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 IGF2-ASQ6U949 168 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 FIP1L1Q6UN15 594 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 CHD3Q12873 2000 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 MEX3AA1L020 520 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 CGAP01215 116 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 OR3A1P47881 315 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 OR2G3Q8NGZ4 309 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 ABHD14AQ9BUJ0 271 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
CLCNKA-201ENST00000331433 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 BHLHA15Q7RTS1 189 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 DRAM1Q8N682 238 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 RNF150Q9ULK6 438 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 A0A1B0GU03 582 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 C12orf77C9JDV5 145 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 K7N7A8 449 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 KITLGP21583 273 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 GCH1P30793 250 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 RAB5CP51148 216 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 RUNX1Q01196 453 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 TCF15Q12870 199 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 GUK1Q16774 197 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF718Q3SXZ3 478 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 RPRMLQ8N4K4 120 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 TPRX1Q8N7U7 411 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 SCRT1Q9BWW7 348 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 EIF5A2Q9GZV4 153 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 STRAPQ9Y3F4 350 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-201ENST00000331433 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 ACAA1P09110 424 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 COQ2Q96H96 371 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 OR5H1A6NKK0 313 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 MMP9P14780 707 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 LMO1P25800 156 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 GABRA2P47869 451 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 BAXQ07812 192 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms