RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 PAX9P55771 341 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 RBM11P57052 281 aaKnown RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 SPCS3P61009 180 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ARL16Q0P5N6 197 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 IGFBP7Q16270 282 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 KCNMB1Q16558 191 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 WDR5BQ86VZ2 330 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 FAM185AQ8N0U4 392 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 FGFBP3Q8TAT2 258 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF488Q96MN9 340 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 MAP1LC3BQ9GZQ8 125 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 TAAR3PQ9P1P4 343 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 CACNG5Q9UF02 275 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 AHCTF1Q8WYP5 2266 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 LRRC3CA6NJW4 275 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 LMO7DNF2Z398 122 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF737O75373 536 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 OPN1MWP04001 364 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 OPN1MW2P0DN77 364 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 OPN1MW3P0DN78 364 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 CHRNA7P36544 502 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 HNRNPKP61978 463 aaKnown RBP eCLIP6.75□□□□□ -1.33
VMA21-201ENST00000330374 SRPXP78539 464 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 PMP22Q01453 160 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZFP36L1Q07352 338 aaKnown RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 EXT1Q16394 746 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 CST9LP1Q5W188 147 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 OR1F12Q8NHA8 337 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 GPR146Q96CH1 333 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 C11orf1Q9H5F2 150 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 PPP1R3CQ9UQK1 317 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF705FA8MVS1 300 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 SCRG1O75711 98 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 DFFBO76075 338 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF705DP0CH99 300 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF705BP0CI00 300 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 ZNF25P17030 456 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 EGR1P18146 543 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 RPL29P47914 159 aaKnown RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 GPM6AP51674 278 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 FAM3BP58499 235 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 SPACA9Q96E40 222 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 SLC39A9Q9NUM3 307 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 PRSS50Q9UI38 385 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 ATG2AQ2TAZ0 1938 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 EN2P19622 333 aaPredicted RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 GNB2P62879 340 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 SLC10A1Q14973 349 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 Q6ZRM9 215 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 YRDCQ86U90 279 aaKnown RBP6.75□□□□□ -1.33
VMA21-201ENST00000330374 OR4F5Q8NH21 305 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 PLPPR1Q8TBJ4 325 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 OR4F4Q96R69 305 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 PSENENQ9NZ42 101 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 KCNS2Q9ULS6 477 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 B4DEV8 164 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 RAC2P15153 192 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 IL24Q13007 206 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 HERPUD1Q15011 391 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 NMSQ5H8A3 153 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 ZNF705AQ6ZN79 300 aaPredicted RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 IL17BQ9UHF5 180 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 ERRFI1Q9UJM3 462 aaPredicted RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 ZNF816-ZNF321PA0A0X1KG74 233 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 A6NNC1 897 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 HNF1AP20823 631 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 CTSSP25774 331 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 WNT5AP41221 380 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 PAX5Q02548 391 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 TNP2Q05952 138 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 SHHQ15465 462 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 BSXQ3C1V8 233 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 MAJINQ3KP22 176 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 SLC23A3Q6PIS1 610 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 ZDHHC23Q8IYP9 409 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 H1FOOQ8IZA3 346 aaPredicted RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 ADPRHL1Q8NDY3 354 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 OR5R1Q8NH85 324 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 TMEM56Q96MV1 263 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 TMEM56-RWDD3S4R434 201 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 DNAJC13O75165 2243 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 IGHV1OR15-9A0A0B4J2B8 117 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 CD300LBA8K4G0 201 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 IL18BPO95998 194 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 CCL3P10147 92 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 NTF4P34130 210 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 MDH2P40926 338 aaKnown RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 UCP3P55916 312 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 EIF3IQ13347 325 aaKnown RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 TMEM241Q24JQ0 296 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 SRXN1Q9BYN0 137 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 MRPL37Q9BZE1 423 aaKnown RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 UCK1Q9HA47 277 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 CISD1Q9NZ45 108 aaKnown RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 A0A0J9YW62 118 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms