RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 V9GY05 133 aa22.06■■□□□ 1.12
ATPAF1-201ENST00000329231 A0A087WXM4 84 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 PDCD5O14737 125 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 CSF1P09603 554 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 MYL9P24844 172 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 BLVRBP30043 206 aaPredicted RBP22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 HES1Q14469 280 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 ABCA11PQ4W5N1 156 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 C22orf42Q6IC83 251 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 FAM53AQ6NSI3 398 aaPredicted RBP22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 CYYR1Q96J86 154 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 WNT10AQ9GZT5 417 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 PLEKHJ1Q9NW61 149 aa22.05■■□□□ 1.12
ATPAF1-201ENST00000329231 FBXO24O75426 580 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 FGF9P31371 208 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 SLC25A48Q6ZT89 311 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 OR10V1Q8NGI7 309 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 LPAR5Q9H1C0 372 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 OR2S2Q9NQN1 319 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 MOB4Q9Y3A3 225 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 WNK1Q9H4A3 2382 aa22.04■■□□□ 1.12
ATPAF1-201ENST00000329231 TET2Q6N021 2002 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 IGHV1-3A0A0C4DH29 117 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 TSPAN15O95858 294 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 TMEM11P17152 192 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 TMEM95Q3KNT9 176 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 STEAP3Q658P3 488 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 MOB3BQ86TA1 216 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 ZNF439Q8NDP4 499 aa22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 WIPF2Q8TF74 440 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 TXNL4BQ9NX01 149 aaKnown RBP22.03■■□□□ 1.12
ATPAF1-201ENST00000329231 A0A0A6YYD4 124 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 SHISA3A0PJX4 238 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 AMY1AP04745 511 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 AMY2AP04746 511 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 LPLP06858 475 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 REG1BP48304 166 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 FAM89BQ8N5H3 189 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 OR51D1Q8NGF3 324 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 FAM3DQ96BQ1 224 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 VCX3AQ9NNX9 186 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 JPT1Q9UK76 154 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 SSR3Q9UNL2 185 aa22.02■■□□□ 1.12
ATPAF1-201ENST00000329231 SLC31A2O15432 143 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 IGKV1D-33P01593 117 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 IGKV1-33P01594 117 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 CLDN12P56749 244 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 HTD2P86397 168 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 CT45A1Q5HYN5 189 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 CT45A3Q8NHU0 189 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 ST6GALNAC6Q969X2 333 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 GALMQ96C23 342 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 RIMS4Q9H426 269 aaPredicted RBP22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 CHMP1AQ9HD42 196 aaPredicted RBP22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 ABRACLQ9P1F3 81 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 STEAP1Q9UHE8 339 aa22.01■■□□□ 1.11
ATPAF1-201ENST00000329231 TXNL1O43396 289 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 CD28P10747 220 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 ZNF134P52741 427 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 ZNF137PP52743 207 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 HNF4GQ14541 408 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 C2orf76Q3KRA6 126 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 MORN2Q502X0 79 aa22■■□□□ 1.11
ATPAF1-201ENST00000329231 FAM110DQ8TAY7 271 aaPredicted RBP22■■□□□ 1.11
ATPAF1-201ENST00000329231 RTN4IP1Q8WWV3 396 aaPredicted RBP22■■□□□ 1.11
ATPAF1-201ENST00000329231 SOCS1O15524 211 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 RGS11O94810 467 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 NAPSAO96009 420 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 CD36P16671 472 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 RAB3BP20337 219 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 EBI3Q14213 229 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 HMGN3Q15651 99 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 C9orf152Q5JTZ5 239 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 HIST2H2BDQ6DRA6 164 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 MOB1BQ7L9L4 216 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 OR52L2PQ8NGH6 319 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 OR51E2Q9H255 320 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 HSF4Q9ULV5 492 aa21.99■■□□□ 1.11
ATPAF1-201ENST00000329231 FGF16O43320 207 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 OR10A3P58181 314 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 HES5Q5TA89 166 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 CENPVQ7Z7K6 275 aaPredicted RBP21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 TGIF2LXQ8IUE1 241 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 IZUMO1Q8IYV9 350 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 OR5AU1Q8NGC0 362 aa21.98■■□□□ 1.11
ATPAF1-201ENST00000329231 IGHV3-72A0A0B4J1Y9 119 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 SH2D7A6NKC9 451 aaPredicted RBP21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 IFITM5A6NNB3 132 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 YPEL1O60688 119 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 CD1BP29016 333 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 VEGFCP49767 419 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 GNMTQ14749 295 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 ZNF880Q6PDB4 577 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 NDUFA11Q86Y39 141 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 OR56B1Q8NGI3 324 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 OR2T10Q8NGZ9 312 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 YPEL2Q96QA6 119 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 CHCHD6Q9BRQ6 235 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 ABHD14AQ9BUJ0 271 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 AK3Q9UIJ7 227 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms