RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 WNT5AP41221 380 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 KRTAP27-1Q3LI81 207 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 HAPLN4Q86UW8 402 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.62
CLGN-201ENST00000325617 TPRX1Q8N7U7 411 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 GATAD1Q8WUU5 269 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 RNF115Q9Y4L5 304 aa11.15□□□□□ -0.62
CLGN-201ENST00000325617 NTN3O00634 580 aaPredicted RBP11.14□□□□□ -0.63
CLGN-201ENST00000325617 SOX15O60248 233 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 IGHV3-13P01766 116 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 F2RP25116 425 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 OR10J5Q8NHC4 309 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 TCTEX1D2Q8WW35 142 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 AURKAIP1Q9NWT8 199 aaPredicted RBP11.14□□□□□ -0.63
CLGN-201ENST00000325617 UCP1P25874 307 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 RHEBQ15382 184 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 KCNE4Q8WWG9 221 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 TMEM68Q96MH6 324 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 SLC25A31Q9H0C2 315 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 DLL3Q9NYJ7 618 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 MT-CO3P00414 261 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 SOD3P08294 240 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 G0S2P27469 103 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 EIF3IQ13347 325 aaKnown RBP11.14□□□□□ -0.63
CLGN-201ENST00000325617 TESK1Q15569 626 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 CEACAM21Q3KPI0 293 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 IL36GQ9NZH8 169 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 FZR1Q9UM11 496 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 LOXL2Q9Y4K0 774 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
CLGN-201ENST00000325617 ADGRG4Q8IZF6 3080 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 CEBPZOSA8MTT3 80 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 NEURL1O76050 574 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 IFNA17P01571 189 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 GRPP07492 148 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 TUBG1P23258 451 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 RAB5CP51148 216 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 LTC4SQ16873 150 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 ZNF826PQ6ZT77 177 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 TMPRSS7Q7RTY8 843 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 COMMD1Q8N668 190 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 PFDN5Q99471 154 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 LHX2P50458 406 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
CLGN-201ENST00000325617 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
CLGN-201ENST00000325617 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 OR2M7Q8NG81 312 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 FRZBQ92765 325 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 SPSB4Q96A44 273 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
CLGN-201ENST00000325617 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
CLGN-201ENST00000325617 INTS1Q8N201 2190 aaKnown RBP11.12□□□□□ -0.63
CLGN-201ENST00000325617 CDIPTO14735 213 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 KRASP01116 189 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 S100A8P05109 93 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 CD200P41217 278 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
CLGN-201ENST00000325617 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 COLCA1Q6ZS62 124 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 GCNT2Q8N0V5 402 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 ATP5SQ99766 215 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 UBE2L5PA0A1B0GUS4 154 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 WNT9BO14905 357 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 DEGS1O15121 323 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 RAMP3O60896 148 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 PGA5P0DJD9 388 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 CLDN18P56856 261 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 RTP5Q14D33 572 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 DCAF12Q5T6F0 453 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 ZNF787Q6DD87 383 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 WDR86Q86TI4 376 aa11.12□□□□□ -0.63
CLGN-201ENST00000325617 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms