RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 H0Y980 276 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 GAPDHP04406 335 aaKnown RBP18.31■□□□□ 0.52
RNF40-201ENST00000324685 C1orf53Q5VUE5 145 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 TXNDC17Q9BRA2 123 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 MRPS18BQ9Y676 258 aaKnown RBP18.31■□□□□ 0.52
RNF40-201ENST00000324685 NAT1P18440 290 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PPP1CCP36873 323 aaKnown RBP18.31■□□□□ 0.52
RNF40-201ENST00000324685 ECSCRQ19T08 205 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 TBX15Q96SF7 602 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PPIAL4EA0A075B759 164 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PPIAL4DF5H284 164 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 K7N7A8 449 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 MPDU1O75352 247 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PPIAL4FP0DN26 164 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 OR1N2Q8NGR9 330 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 ELOVL1Q9BW60 279 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PPIAL4AQ9Y536 164 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 C16orf97H3BN30 126 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 CDK2AP1O14519 115 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 PRDX2P32119 198 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 NRTNQ99748 197 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 HDHD3Q9BSH5 251 aaPredicted RBP18.31■□□□□ 0.52
RNF40-201ENST00000324685 TMEM189A5PLL7 270 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 RCC1P18754 421 aaPredicted RBP18.3■□□□□ 0.52
RNF40-201ENST00000324685 TWIST1Q15672 202 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 MARS2Q96GW9 593 aaKnown RBP18.3■□□□□ 0.52
RNF40-201ENST00000324685 IL17BQ9UHF5 180 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 COL25A1Q9BXS0 654 aaPredicted RBP18.3■□□□□ 0.52
RNF40-201ENST00000324685 TMEM238LA0A1B0GVL6 79 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 A6NJY4 79 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 DHRS7CA6NNS2 312 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 CEACAM21Q3KPI0 293 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 OVCH2Q7RTZ1 564 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 MS4A7Q9GZW8 240 aaPredicted RBP18.3■□□□□ 0.52
RNF40-201ENST00000324685 CA2P00918 260 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 NGFRP08138 427 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 ZNF441Q8N8Z8 693 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 FSCN3Q9NQT6 498 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 PXMP4Q9Y6I8 212 aa18.3■□□□□ 0.52
RNF40-201ENST00000324685 TMSB15BA0A087X1C1 80 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 CEBPDP49716 269 aaPredicted RBP18.29■□□□□ 0.52
RNF40-201ENST00000324685 COL5A1-AS1Q5SY13 56 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 GCSAMQ8N6F7 178 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 RAB37Q96AX2 223 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 SMOC1Q9H4F8 434 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 TRAV39A0A0B4J263 110 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 A8MWL6 223 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 ERVFRD-1P60508 538 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 CALHM1Q8IU99 346 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 OR2J1Q9GZK6 312 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 FAM27BQ5VT28 67 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 SGMS2Q8NHU3 365 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 ZNF256Q9Y2P7 627 aaPredicted RBP18.29■□□□□ 0.52
RNF40-201ENST00000324685 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 NRIP2Q9BQI9 281 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 KLHDC2Q9Y2U9 406 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 TAF1P21675 1872 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 IGKV3-7A0A075B6H7 116 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 ABHD14BQ96IU4 210 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 MEGF10Q96KG7 1140 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 SCNM1Q9BWG6 230 aa18.29■□□□□ 0.52
RNF40-201ENST00000324685 ARAP2Q8WZ64 1704 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 PLPPR5Q32ZL2 321 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 ZNF714Q96N38 554 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 CLDN14O95500 239 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 RPL31P62899 125 aaKnown RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 PEBP1P30086 187 aaKnown RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 TTTY12Q9BZ98 90 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 LOC102724200A0A096LPH7 203 aaPredicted RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 NMUP48645 174 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 NANOS3P60323 173 aaKnown RBP18.28■□□□□ 0.52
RNF40-201ENST00000324685 FGF12P61328 243 aa18.28■□□□□ 0.52
RNF40-201ENST00000324685 MGST3O14880 152 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 CD74P04233 296 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 ASAH2BP0C7U1 165 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 VSIG10L2P0DP72 767 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 RELBQ01201 579 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 DCAF10Q5QP82 559 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 CYB561D1Q8N8Q1 229 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 SOSTQ9BQB4 213 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 WFDC3Q8IUB2 231 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 ZNF645Q8N7E2 425 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 DUSP15Q9H1R2 295 aaPredicted RBP18.27■□□□□ 0.52
RNF40-201ENST00000324685 AURKAIP1Q9NWT8 199 aaPredicted RBP18.27■□□□□ 0.52
RNF40-201ENST00000324685 TUBD1Q9UJT1 453 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 DXOO77932 396 aaKnown RBP18.27■□□□□ 0.52
RNF40-201ENST00000324685 MFAP2P55001 183 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 ZPLD1Q8TCW7 415 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 GPA33Q99795 319 aa18.27■□□□□ 0.52
RNF40-201ENST00000324685 APELAP0DMC3 54 aa18.27■□□□□ 0.51
RNF40-201ENST00000324685 ZNF385AQ96PM9 386 aaKnown RBP18.27■□□□□ 0.51
RNF40-201ENST00000324685 MIEN1Q9BRT3 115 aa18.27■□□□□ 0.51
RNF40-201ENST00000324685 LOC389332A0A1B0GUA5 103 aa18.26■□□□□ 0.51
RNF40-201ENST00000324685 CEACAM18A8MTB9 384 aa18.26■□□□□ 0.51
RNF40-201ENST00000324685 HSPB1P04792 205 aaKnown RBP18.26■□□□□ 0.51
RNF40-201ENST00000324685 MUC1P15941 1255 aaPredicted RBP18.26■□□□□ 0.51
RNF40-201ENST00000324685 C10orf111Q8N326 155 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms