RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 FAM209AQ5JX71 171 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 ZNF880Q6PDB4 577 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 LOC285556D6RIA3 1793 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 PIN1P1O15428 100 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 SEMA7AO75326 666 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 NPY1RP25929 384 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 HOXA6P31267 233 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 IGLV3-21P80748 117 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 ELOBQ15370 118 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 ZNF660Q6AZW8 331 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 SELENOHQ8IZQ5 122 aaKnown RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 SH2D7A6NKC9 451 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 CTSBP07858 339 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 FGF5P12034 268 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 UCP2P55851 309 aa9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 PTPRFP10586 1907 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 ZNF638Q14966 1978 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A10PA6NDY2 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A18PA6NE21 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A16PA6NEW6 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A20PA6NIJ5 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A8PA6NJQ4 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A7PA6NKC0 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A22PA8MWA6 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A12PA8MX19 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A5PA8MXJ8 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A23PA8MXZ1 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 F5H697 171 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 DNASE2O00115 360 aaPredicted RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 OR2H2O95918 312 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A15PP0C7V4 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A13PP0C7W8 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A14PP0C7W9 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM90A24PP0C7X0 464 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 OR10J1P30954 320 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 RIGQ13278 110 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 NUDT16L1Q9BRJ7 211 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 CBY3A6NI87 242 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM157AC9JC47 383 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 GNG7O60262 68 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 SRP14P37108 136 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 CTHRC1Q96CG8 243 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 DDA1Q9BW61 102 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 RBKSQ9H477 322 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 A0A1W2PP11 408 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 A0A1W2PPE3 182 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 BCL2P10415 239 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 TMEM54Q969K7 222 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 NRIP2Q9BQI9 281 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 OPN3Q9H1Y3 402 aaPredicted RBP9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 UBTD1Q9HAC8 227 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 SCTP09683 121 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 GAMTQ14353 236 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 CD1BP29016 333 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 Q6ZN92 141 aa9.45□□□□□ -0.9
SNRNP200-201ENST00000323853 ZNF253O75346 499 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 HBZP02008 142 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 P2RY4P51582 365 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 GTF2H5Q6ZYL4 71 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 EIF4E3Q8N5X7 224 aaKnown RBP9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 OR1L8Q8NGR8 309 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 J3QR06 171 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 RAB29O14966 203 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 OR5AU1Q8NGC0 362 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 SRXN1Q9BYN0 137 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 NMBP08949 121 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 IER3P46695 156 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 RTP5Q14D33 572 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 BET1LQ9NYM9 111 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 OR2T8A6NH00 312 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 EPOPA6NHQ4 379 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 M0R143 59 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 F2RL2O00254 374 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 BRS3P32247 399 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 GUCA2BQ16661 112 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 PITPNC1Q9UKF7 332 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 ZFC3H1O60293 1989 aaKnown RBP9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 A0A087X0M5 115 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 A0A1B0GX30 115 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 SMPD2O60906 423 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 COX6A1P12074 109 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 IFITM2Q01629 132 aa9.44□□□□□ -0.9
SNRNP200-201ENST00000323853 SLC25A45Q8N413 288 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms