RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ZNF430Q9H8G1 570 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 DEPPQ9NTK1 212 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 C1orf123Q9NWV4 160 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 NSG2Q9Y328 171 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 DOPEY1Q5JWR5 2465 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 FREM3P0C091 2139 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 COL8A1P27658 744 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 BMI1P35226 326 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 ARHGAP11BQ3KRB8 267 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 OCIAD2Q56VL3 154 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 GFRALQ6UXV0 394 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 SULF2Q8IWU5 870 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 OR5H2Q8NGV7 314 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 TUBD1Q9UJT1 453 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 C14orf166Q9Y224 244 aaKnown RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 SLC5A6Q9Y289 635 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 ASH1LQ9NR48 2969 aaKnown RBP8.07□□□□□ -1.12
CAPN3-201ENST00000318023 A0A1W2PNV4 684 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 FAM230AA0A1W2PPH8 454 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 GRIFINA4D1Z8 144 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 OPN1LWP04000 364 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
CAPN3-201ENST00000318023 AMY2BP19961 511 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 GCH1P30793 250 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 GALR1P47211 349 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 MEOX1P50221 254 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 C3AR1Q16581 482 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 TEX43Q6ZNM6 134 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 MCEMP1Q8IX19 187 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF619Q8N2I2 560 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 TXN2Q99757 166 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 WWTR1Q9GZV5 400 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM242Q9NWH2 141 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 IL19Q9UHD0 177 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 COX11Q9Y6N1 276 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 TACC2O95359 2948 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 ABCA4P78363 2273 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 CELSR2Q9HCU4 2923 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 NPIPA2E9PIF3 369 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 NPIPA3F8WFD2 350 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF205O95201 554 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 IFNA21P01568 189 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 SP1P08047 785 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 EMDP50402 254 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 DCST2Q5T1A1 773 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 DPY19L2P2Q6ZN68 376 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 RNF144BQ7Z419 303 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF738Q8NE65 137 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 SDF2L1Q9HCN8 221 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM106BQ9NUM4 274 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 CES1P1Q9UKY3 287 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 CACNA1DQ01668 2161 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 SHANK1Q9Y566 2161 aa8.07□□□□□ -1.12
CAPN3-201ENST00000318023 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 DBIP07108 87 aaKnown RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF43P17038 809 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 DTYMKP23919 212 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 CLDN17P56750 224 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 VAMP3Q15836 100 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ACTL10Q5JWF8 245 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 Q6ZN92 141 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 LINC01551Q86U37 167 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 WDFY1Q8IWB7 410 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 OR52M1Q8NGK5 317 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 BCL2L2Q92843 193 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 TNFRSF14Q92956 283 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF665Q9H7R5 613 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF701Q9NV72 531 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 OR6C3Q9NZP0 311 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 LAMTOR2Q9Y2Q5 125 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 FAM24AA6NFZ4 105 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 SOCS1O15524 211 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 LILRA1O75019 489 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 RAD51DO75771 328 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 H2BFMP0C1H6 154 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 UBE2G2P60604 165 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 PLCXD2Q0VAA5 305 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 PRICKLE4Q2TBC4 344 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 DMRTC1Q5HYR2 192 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 TSPO2Q5TGU0 170 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 OR51G1Q8NGK1 321 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 MOB3AQ96BX8 217 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 METTL7AQ9H8H3 244 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 KLRF1Q9NZS2 232 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 B3GALT5Q9Y2C3 310 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 IGHV2-70DA0A0C4DH43 119 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 A0A1W2PP11 408 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 MPZL1O95297 269 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 P04436 131 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 RFPL3SP0C7P2 107 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 GABRA3P34903 492 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 MAGEA5P43359 124 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 FAM3BP58499 235 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 PNRC1Q12796 327 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM241Q24JQ0 296 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms