RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 CGB3P0DN86 165 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 CGB7P0DN87 165 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 ZBTB25P24278 435 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 BTNL3Q6UXE8 466 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 Q8N7P7 452 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 RDH8Q9NYR8 311 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 RNF150Q9ULK6 438 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 A8MXK9 166 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 B4DSR2 109 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 SLC31A2O15432 143 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 IGHV4-31P0DP07 118 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 FPR2P25090 351 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 DLX6P56179 175 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 LOXL3P58215 753 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 PAX2Q02962 417 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 DCAF12L2Q5VW00 463 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 CORO2AQ92828 525 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF69Q9UC07 566 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 MGAT4AQ9UM21 535 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 CUBNO60494 3623 aa12.62□□□□□ -0.39
PDLIM5-202ENST00000318007 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 ST8SIA5O15466 376 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 CD74P04233 296 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 PI3P19957 117 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 AADACP22760 399 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 PAX6P26367 422 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 BTCP35070 178 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 DYRK1AQ13627 763 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 TRAT1Q6PIZ9 186 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 NRARPQ7Z6K4 114 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 PNKDQ8N490 385 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 OR6F1Q8NGZ6 308 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 C8orf46Q8TAG6 207 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 TAS2R3Q9NYW6 316 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 A0A1W2PPH5 198 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 CENPXA8MT69 81 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 TOX4O94842 621 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF735P0CB33 412 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 FAUP35544 74 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF134P52741 427 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 RAB25P57735 213 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 CR1LQ2VPA4 569 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 HEPN1Q6WQI6 88 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 Q6ZS49 121 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 LINC01356Q8N9X3 169 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 OR8U1Q8NH10 309 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 TMEM186Q96B77 213 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 ABHD14BQ96IU4 210 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 SMR3AQ99954 134 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 CABLES2Q9BTV7 478 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 KCNS2Q9ULS6 477 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 PSG11Q9UQ72 335 aa12.61□□□□□ -0.39
PDLIM5-202ENST00000318007 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 OR5H14A6NHG9 310 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 DEFA1P59665 94 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 DEFA3P59666 94 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 DACT3Q96B18 629 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 FLVCR2Q9UPI3 526 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 ABCA1O95477 2261 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.394e-6■□□□□ 9.7
PDLIM5-202ENST00000318007 C17orf98A8MV24 154 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 DISC1C4P0D8 188 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 F2RL2O00254 374 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 TNFSF12O43508 249 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 PPYP01298 95 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 SPNP16150 400 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 ASAH1Q13510 395 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 MEF2DQ14814 521 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 MORN2Q502X0 79 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 ACTBL2Q562R1 376 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 ENKURQ8TC29 256 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 LHX4Q969G2 390 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 MRGPRFQ96AM1 343 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 BEX2Q9BXY8 128 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 MMP28Q9H239 520 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 C7orf69Q9H7B7 122 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms