RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PXMP4Q9Y6I8 212 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 HELZP42694 1942 aaKnown RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 C11orf94C9JXX5 98 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 SYNGR3O43761 229 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 WISP1O95388 367 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 IL3RAP26951 378 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 ELLP55199 621 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 RAC3P60763 192 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 TESK1Q15569 626 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 AAED1Q7RTV5 226 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 OR10V1Q8NGI7 309 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 OR51H1Q8NH63 302 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 SGMS2Q8NHU3 365 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 PIGCQ92535 297 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 REPIN1Q9BWE0 567 aaKnown RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 MRPS18CQ9Y3D5 142 aaKnown RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 A0A1W2PPV4 95 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 CLDN1O95832 211 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 MT-CO2P00403 227 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 GYPAP02724 150 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 UMODP07911 640 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 MPLP40238 635 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 KLF3P57682 345 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 CCL7P80098 99 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 OR5I1Q13606 314 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 CADM4Q8NFZ8 388 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF501Q96CX3 271 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 UHRF2Q96PU4 802 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 ASCL3Q9NQ33 180 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 NUP210Q8TEM1 1887 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-201ENST00000316707 SEC16AO15027 2179 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 CCDC163A0A0D9SF12 145 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 OR5B21A6NL26 309 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF205O95201 554 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 MDKP21741 143 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-201ENST00000316707 CDC34P49427 236 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-201ENST00000316707 RPP30P78346 268 aaKnown RBP4.09□□□□□ -1.76
PTPN13-201ENST00000316707 SSX7Q7RTT5 188 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 OR10G8Q8NGN5 311 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 WFIKKN1Q96NZ8 548 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 FOXB1Q99853 325 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 RARRES3Q9UL19 164 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-27A0A075B6S5 117 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF90Q03938 601 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 Q0VG73 95 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 SPANXN5Q5MJ07 72 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 FAM69BQ5VUD6 431 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 LINC01551Q86U37 167 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 FADS6Q8N9I5 356 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 C22orf15Q8WYQ4 148 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 POLR3KQ9Y2Y1 108 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-201ENST00000316707 MPC1Q9Y5U8 109 aa4.09□□□□□ -1.76
PTPN13-201ENST00000316707 METTL12A8MUP2 240 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 FGF8P55075 233 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 DSCR4P56555 118 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF726P1Q15940 193 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF774Q6NX45 483 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM92Q6UXU6 159 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 BAGE3Q86Y29 109 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 BAGE2Q86Y30 109 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 OR5A2Q8NGI9 324 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 SGCZQ96LD1 299 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 TXN2Q99757 166 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ERRFI1Q9UJM3 462 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 REG1AP05451 166 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF32P17041 273 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 MRPS11P82912 194 aaKnown RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ANKRD39Q53RE8 183 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 CST9LP1Q5W188 147 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 Q8IYB0 196 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 APOBEC3DQ96AK3 386 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 CLDN23Q96B33 292 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 OR2H1Q9GZK4 316 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 OR2J1Q9GZK6 312 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 C2orf72A6NCS6 295 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 PAGE4O60829 102 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 FAM162BQ5T6X4 162 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 RPS19BP1Q86WX3 136 aaKnown RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 THAP3Q8WTV1 239 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 SDSLQ96GA7 329 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ATG101Q9BSB4 218 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 DNAJC4Q9NNZ3 241 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 KCNIP1Q9NZI2 227 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 SIAH2O43255 324 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF253O75346 499 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 BRS3P32247 399 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 CHRNA7P36544 502 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 P2RY6Q15077 328 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 RAET1LQ5VY80 246 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 C11orf42Q8N5U0 333 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 SIGLECL1Q8N7X8 197 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 NECAP1Q8NC96 275 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 TSTD1Q8NFU3 115 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 KCNE4Q8WWG9 221 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 OR5P3Q8WZ94 311 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 RASL10BQ96S79 203 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 GAL3ST2Q9H3Q3 398 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms