RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 FAM53BQ14153 422 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 MFSD12Q6NUT3 480 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 FAM57BQ71RH2 274 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 LRRC25Q8N386 305 aaPredicted RBP10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 LOXL2Q9Y4K0 774 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 KNTC1P50748 2209 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 SCRG1O75711 98 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 NUDT3O95989 172 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 SMIM10L1P0DMW3 83 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 MGST1P10620 155 aaKnown RBP10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 KITLGP21583 273 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 GABRA6Q16445 453 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 Q56UQ5 140 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 C1QL3Q5VWW1 255 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 TGIF2LYQ8IUE0 185 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 SLC22A24Q8N4F4 322 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 SMIM10Q96HG1 83 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 ARHGAP5-AS1Q96IT6 56 aa10.13□□□□□ -0.79
LDLRAD3-201ENST00000315571 ZNF728P0DKX0 622 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 MC5RP33032 325 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 CDCP2Q5VXM1 449 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 TMEM64Q6YI46 380 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR13G1Q8NGZ3 307 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 ABI3Q9P2A4 366 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 NUPR1O60356 82 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 CLEC3BP05452 202 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 SERPINE2P07093 398 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 CCL4P13236 92 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 PTGER4P35408 488 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 FBXW4P57775 412 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 Q6ZWC4 215 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 STXBP6Q8NFX7 210 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 PLEKHJ1Q9NW61 149 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 LOC102723971A0A1B0GUV8 181 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR2T8A6NH00 312 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 HYPMO75409 117 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 GFRA1P56159 465 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 RPS4XP62701 263 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 SUPT4H1P63272 117 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 IL11RAQ14626 422 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 DNM1P46Q6ZS02 220 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR51G1Q8NGK1 321 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 SLC45A2Q9UMX9 530 aa10.12□□□□□ -0.79
LDLRAD3-201ENST00000315571 TRBV5-7A0A0A0MS05 114 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 USF1P22415 310 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 OPRM1P35372 400 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 DUSP2Q05923 314 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 RUNX2Q13950 521 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 H1FOOQ8IZA3 346 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR4N2Q8NGD1 307 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR5D14Q8NGL3 314 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 ASB5Q8WWX0 329 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 PLEKHF2Q9H8W4 249 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 DAPP1Q9UN19 280 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 SCN3AQ9NY46 2000 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 MDC1Q14676 2089 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 A0A1B0GX78 115 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 FOXS1O43638 330 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 TSPAN2O60636 221 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 OR1D4P47884 311 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 ZNF154Q13106 437 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 IL13RA2Q14627 380 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 LINC00346Q8IVM7 164 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 ZNF595Q8IYB9 648 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 FAM71F1Q96KD3 344 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 AMELYQ99218 206 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 RTBDNQ9BSG5 229 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 LYRM4Q9HD34 91 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 SLC25A17O43808 307 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 SLC6A8P48029 635 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 RAB31Q13636 194 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 TRMT12Q53H54 448 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 SPSB3Q6PJ21 355 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
LDLRAD3-201ENST00000315571 MED12Q93074 2177 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 DPRXA6NFQ7 191 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 H0YIG0 161 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 NPIPB7O75200 414 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 GYPAP02724 150 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 CBLN1P23435 193 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 TSPOP30536 169 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 CKS1BP61024 79 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 RPS18P62269 152 aaKnown RBP10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 CA13Q8N1Q1 262 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 SCRT1Q9BWW7 348 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 PPP1R3CQ9UQK1 317 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 ZNF253O75346 499 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 RELBQ01201 579 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 EIF3IQ13347 325 aaKnown RBP10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 COA6Q5JTJ3 125 aaKnown RBP10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 DCAF12Q5T6F0 453 aa10.1□□□□□ -0.79
LDLRAD3-201ENST00000315571 ARHGEF39Q8N4T4 335 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms