RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 VCX3BQ9H321 246 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 CHMP1AQ9HD42 196 aaPredicted RBP10.06□□□□□ -0.8
CKS2-201ENST00000314355 STEAP1Q9UHE8 339 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 PDCD6O75340 191 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 BPNT1O95861 308 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 OR5H8P0DN80 308 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 VDAC1P21796 283 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 SOX6P35712 828 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 MYCNOSP40205 109 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 GP2P55259 537 aaKnown RBP10.05□□□□□ -0.8
CKS2-201ENST00000314355 RPL23AP62750 156 aaKnown RBP10.05□□□□□ -0.8
CKS2-201ENST00000314355 TRAM1Q15629 374 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 MORN2Q502X0 79 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 TCTEX1D4Q5JR98 221 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 CEACAM19Q7Z692 300 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 OR1L1Q8NH94 360 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 PHYHIPQ92561 330 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 UFD1Q92890 307 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 Q96M66 194 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 NOL4LQ96MY1 436 aaPredicted RBP10.05□□□□□ -0.8
CKS2-201ENST00000314355 URM1Q9BTM9 101 aaKnown RBP10.05□□□□□ -0.8
CKS2-201ENST00000314355 TMEM59Q9BXS4 323 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 ABCG5Q9H222 651 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 PLEKHJ1Q9NW61 149 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 ZNF581Q9P0T4 197 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 LINC00527Q9UJ94 153 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
CKS2-201ENST00000314355 YPEL1O60688 119 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 SC5DO75845 299 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 HSMCR30P0CW71 290 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 RCC1P18754 421 aaPredicted RBP10.04□□□□□ -0.8
CKS2-201ENST00000314355 HTR2CP28335 458 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 HTD2P86397 168 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
CKS2-201ENST00000314355 CT45A1Q5HYN5 189 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 C10orf99Q6UWK7 81 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 ZNF695Q8IW36 515 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 TMEM104Q8NE00 496 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 KLHL30-AS1Q8NEE0 82 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 FBLIM1Q8WUP2 373 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 S1PR3Q99500 378 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 ZNF251Q9BRH9 671 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 CHCHD6Q9BRQ6 235 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 CCDC90BQ9GZT6 254 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 RIMS4Q9H426 269 aaPredicted RBP10.04□□□□□ -0.8
CKS2-201ENST00000314355 PLGRKTQ9HBL7 147 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 AURKAIP1Q9NWT8 199 aaPredicted RBP10.04□□□□□ -0.8
CKS2-201ENST00000314355 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
CKS2-201ENST00000314355 LANCL1O43813 399 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 ARL6IP5O75915 188 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 ELANEP08246 267 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 PSMA1P25786 263 aaKnown RBP10.03□□□□□ -0.8
CKS2-201ENST00000314355 VHLP40337 213 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 GPR12P47775 334 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 PSMD7P51665 324 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 MRPS15P82914 257 aaKnown RBP10.03□□□□□ -0.8
CKS2-201ENST00000314355 TMEM65Q6PI78 240 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 OR2W3Q7Z3T1 314 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 GAPTQ8N292 157 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 OR2AK2Q8NG84 335 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 SETD6Q8TBK2 473 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 IL1F10Q8WWZ1 152 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 ST6GALNAC6Q969X2 333 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 ABHD14AQ9BUJ0 271 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 GHITMQ9H3K2 345 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 MBNL3Q9NUK0 354 aaKnown RBP10.03□□□□□ -0.8
CKS2-201ENST00000314355 FKBP14Q9NWM8 211 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 KIAA1456Q9P272 454 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 MGAT4AQ9UM21 535 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 VWFP04275 2813 aa10.03□□□□□ -0.8
CKS2-201ENST00000314355 RGS10O43665 173 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 ARSBP15848 533 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 BLVRBP30043 206 aaPredicted RBP10.02□□□□□ -0.81
CKS2-201ENST00000314355 THBS3P49746 956 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 ZNF134P52741 427 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 ZNF137PP52743 207 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 RAB25P57735 213 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 RPS27AP62979 156 aaKnown RBP10.02□□□□□ -0.81
CKS2-201ENST00000314355 MMDQ15546 238 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 C1orf100Q5SVJ3 147 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 Q6ZPA2 131 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 MRPL41Q8IXM3 137 aaKnown RBP10.02□□□□□ -0.81
CKS2-201ENST00000314355 Q8N9W7 124 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 OR52L2PQ8NGH6 319 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 OR6M1Q8NGM8 313 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 MRPL30Q8TCC3 161 aaKnown RBP10.02□□□□□ -0.81
CKS2-201ENST00000314355 FAAP24Q9BTP7 215 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 PIPOXQ9P0Z9 390 aa10.02□□□□□ -0.81
CKS2-201ENST00000314355 ZNF107Q9UII5 783 aaPredicted RBP10.02□□□□□ -0.81
CKS2-201ENST00000314355 SLC31A2O15432 143 aa10.01□□□□□ -0.81
CKS2-201ENST00000314355 HSPA12AO43301 675 aa10.01□□□□□ -0.81
CKS2-201ENST00000314355 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
CKS2-201ENST00000314355 FOXE3Q13461 319 aa10.01□□□□□ -0.81
CKS2-201ENST00000314355 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
CKS2-201ENST00000314355 LIPKQ5VXJ0 399 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms