RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PHB2Q99623 299 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 MGAT4CQ9UBM8 478 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 KBTBD11-OT1A0A1B0GTJ5 212 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 HSD17B6O14756 317 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 DUS4LO95620 317 aaKnown RBP18.66■□□□□ 0.58
IRF3-201ENST00000309877 CGB3P0DN86 165 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 CGB7P0DN87 165 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 GNRHRP30968 328 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 GNMTQ14749 295 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 RANGRFQ9HD47 186 aaPredicted RBP18.66■□□□□ 0.58
IRF3-201ENST00000309877 SLC2A9Q9NRM0 540 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 LPAR3Q9UBY5 353 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 CLN8Q9UBY8 286 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 MIOXQ9UGB7 285 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 LINC00312Q9Y6C7 94 aa18.66■□□□□ 0.58
IRF3-201ENST00000309877 IGHV3-43A0A0B4J1X8 118 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 GPR31O00270 319 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 IGHV3-43DP0DP04 118 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 RPS2P15880 293 aaKnown RBP18.65■□□□□ 0.58
IRF3-201ENST00000309877 PPP1CCP36873 323 aaKnown RBP18.65■□□□□ 0.58
IRF3-201ENST00000309877 SLC9A3R2Q15599 337 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 TMEM155Q4W5P6 130 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 FAM185AQ8N0U4 392 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 SPICQ8N5J4 248 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 OR2AK2Q8NG84 335 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 MITD1Q8WV92 249 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 RTN4IP1Q8WWV3 396 aaPredicted RBP18.65■□□□□ 0.58
IRF3-201ENST00000309877 CCL28Q9NRJ3 127 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 C19orf12Q9NSK7 152 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 GNG12Q9UBI6 72 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 KCNIP3Q9Y2W7 256 aa18.65■□□□□ 0.58
IRF3-201ENST00000309877 UBE2J1Q9Y385 318 aaPredicted RBP18.65■□□□□ 0.58
IRF3-201ENST00000309877 LRBAP50851 2863 aa18.64■□□□□ 0.58
IRF3-201ENST00000309877 CRYM-AS1A6NIL9 109 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 ZNF729A6NN14 1252 aaPredicted RBP18.64■□□□□ 0.57
IRF3-201ENST00000309877 F2RL2O00254 374 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 FCN3O75636 299 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 CXCL3P19876 107 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 GPR6P46095 362 aaPredicted RBP18.64■□□□□ 0.57
IRF3-201ENST00000309877 SUPT4H1P63272 117 aaKnown RBP18.64■□□□□ 0.57
IRF3-201ENST00000309877 C17orf58Q2M2W7 97 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 ZNF818PQ6ZRF7 136 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 NLRC3Q7RTR2 1065 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 TCF23Q7RTU1 214 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 CMTM1Q8IZ96 169 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 TOLLIPQ9H0E2 274 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 PARP12Q9H0J9 701 aaKnown RBP18.64■□□□□ 0.57
IRF3-201ENST00000309877 JPT1Q9UK76 154 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 CHD6Q8TD26 2715 aa18.64■□□□□ 0.57
IRF3-201ENST00000309877 BOLA2-SMG1P6H3BVE0 249 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 IFNA2P01563 188 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 OR8U9P0C7N5 309 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 OMGP23515 440 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 S100GP29377 79 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 OR8B3Q8NGG8 313 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 OR8U1Q8NH10 309 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 IGFBPL1Q8WX77 278 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 OR8B2Q96RD0 313 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 NAA60Q9H7X0 242 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 TAS2R3Q9NYW6 316 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 KCNS2Q9ULS6 477 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 GOSR2O14653 212 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 SLC22A5O76082 557 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 ANXA3P12429 323 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 FAM53AQ6NSI3 398 aaPredicted RBP18.63■□□□□ 0.57
IRF3-201ENST00000309877 KCTD9Q7L273 389 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 COQ8AQ8NI60 647 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 NEIL1Q96FI4 390 aaPredicted RBP18.63■□□□□ 0.57
IRF3-201ENST00000309877 FYTTD1Q96QD9 318 aaKnown RBP18.63■□□□□ 0.57
IRF3-201ENST00000309877 GAL3ST2Q9H3Q3 398 aa18.63■□□□□ 0.57
IRF3-201ENST00000309877 KIAA2026Q5HYC2 2103 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 SPTAN1Q13813 2472 aaKnown RBP18.62■□□□□ 0.57
IRF3-201ENST00000309877 RND3P61587 244 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 TMEM200BQ69YZ2 307 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 LIN54Q6MZP7 749 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 LDLRAD3Q86YD5 345 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 IDI2-AS1Q9NZ38 188 aa18.62■□□□□ 0.57
IRF3-201ENST00000309877 COL12A1Q99715 3063 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 GPR37O15354 613 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 MPPED1O15442 326 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 RGS11O94810 467 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 ZNF273Q14593 569 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 EDARADDQ8WWZ3 215 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 DMRTB1Q96MA1 342 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 ZNF714Q96N38 554 aa18.61■□□□□ 0.57
IRF3-201ENST00000309877 ZNF436Q9C0F3 470 aaPredicted RBP18.61■□□□□ 0.57
IRF3-201ENST00000309877 TRBV23-1A0A0A0MS06 115 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 YPEL1O60688 119 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 WNT2P09544 360 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 LOXL3P58215 753 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 MORN2Q502X0 79 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 ZNF841Q6ZN19 808 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 ZNF295-AS1Q8N0V1 137 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 BVESQ8NE79 360 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 AKR1E2Q96JD6 320 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 YPEL2Q96QA6 119 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 LINC00574Q9H8X3 128 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 A0A0B4J2A0 478 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 IGHV4-39P01824 125 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 C2orf68Q2NKX9 166 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms