RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 OPN1MW3P0DN78 364 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 CLDN18P56856 261 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 TIGITQ495A1 244 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 SSX8Q7RTT4 187 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF429Q86V71 674 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 UBAC2Q8NBM4 344 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 CLRN3Q8NCR9 226 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 GFI1Q99684 422 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 FKBP11Q9NYL4 201 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 LRRC3CA6NJW4 275 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 NMBP08949 121 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 G6PCP35575 357 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 PLAURQ03405 335 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF660Q6AZW8 331 aaPredicted RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 RAB1CQ92928 201 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10C1Q96KK4 312 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 TM2D1Q9BX74 207 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 OSGIN2Q9Y236 505 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF716A6NP11 495 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 CDRT15L2A8MXV6 281 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 HBZP02008 142 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 COX7A1P24310 79 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 PTGDSP41222 190 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 UBE2G1P62253 170 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 BMPERQ8N8U9 685 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 NEIL1Q96FI4 390 aaPredicted RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 C1QTNF5Q9BXJ0 243 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 RCC2Q9P258 522 aaKnown RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF319Q9P2F9 582 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 GBF1Q92538 1859 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 CEACAM1P13688 526 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 RPS2P15880 293 aaKnown RBP9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 BTCP35070 178 aa9.81□□□□□ -0.84
PCDHGC3-201ENST00000308177 HEATR5AQ86XA9 2040 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 POLEQ07864 2286 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 H0Y980 276 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 MBPP02686 304 aaPredicted RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 SEC11BP0C7V7 166 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 NQO2P16083 231 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 GNB2P62879 340 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF385CQ66K41 422 aaPredicted RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 SIGIRRQ6IA17 410 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 NECAP1Q8NC96 275 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ITLN1Q8WWA0 313 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR5P3Q8WZ94 311 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 HES4Q9HCC6 221 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 FANCMQ8IYD8 2048 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 PINLYPA6NC86 204 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF705GA8MUZ8 300 aaPredicted RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 CCL21O00585 134 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 COX7A2P2O60397 106 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 PRRX1P54821 245 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZP1P60852 638 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 NHLH2Q02577 135 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 CALHM1Q8IU99 346 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR52L2PQ8NGH6 319 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 REPIN1Q9BWE0 567 aaKnown RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 HELZP42694 1942 aaKnown RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10G4Q8NGN3 311 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10G9Q8NGN4 311 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10G7Q8NGN6 311 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR13D1Q8NGV5 346 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 LIPGQ9Y5X9 500 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 K7EQM0 130 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 DEDDO75618 318 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 CLDN14O95500 239 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 CEBPDP49716 269 aaPredicted RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 STPG2Q8N412 459 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZIC4Q8N9L1 334 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR51I2Q9H344 312 aa9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 PATZ1Q9HBE1 687 aaKnown RBP9.8□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF318Q5VUA4 2279 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 IGKV1-9A0A0C4DH69 117 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 OR10J4P0C629 311 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 MPV17P39210 176 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 RPL31P62899 125 aaKnown RBP9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 VWA1Q6PCB0 445 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 GPHA2Q96T91 129 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 FBLN5Q9UBX5 448 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 NAT2P11245 290 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 CCL1P22362 96 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 FHL1Q13642 323 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 VSTM2AQ8TAG5 236 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 BCL2L2Q92843 193 aaPredicted RBP9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 WDYHV1Q96HA8 205 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPIAL4EA0A075B759 164 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPIAL4DF5H284 164 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPIAL4FP0DN26 164 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 HNF1AP20823 631 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 ATP6V0CP27449 155 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 OPRK1P41145 380 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 TMEM252Q8N6L7 170 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms