RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 TPT1P13693 172 aaKnown RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 CD40P25942 277 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 PPP1CCP36873 323 aaKnown RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 NKX6-1P78426 367 aaPredicted RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 KRBOX4Q5JUW0 171 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 STPG2Q8N412 459 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 ZNRF1Q8ND25 227 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 OR1S2Q8NGQ3 325 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 OR13A1Q8NGR1 328 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 RBMXL1Q96E39 390 aaKnown RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 DNAJB11Q9UBS4 358 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 MED19A0JLT2 244 aaPredicted RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 TMEM30CPA0ZSE6 113 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 SSSCA1O60232 199 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 HBZP02008 142 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 F2RP25116 425 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 PRDX2P32119 198 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 GLRXP35754 106 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 MDH2P40926 338 aaKnown RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 DMBX1Q8NFW5 382 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 DNTTIP1Q9H147 329 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 BARX1Q9HBU1 254 aaPredicted RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 WFDC1Q9HC57 220 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 MBNL3Q9NUK0 354 aaKnown RBP9.55□□□□□ -0.88
SCG2-201ENST00000305409 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
SCG2-201ENST00000305409 FAM24AA6NFZ4 105 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TUBAL3A6NHL2 446 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TSPAN9O75954 239 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 CDS2O95674 445 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 IL2RGP31785 369 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 ID4P47928 161 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 SMIM21Q3B7S5 101 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 BTNL3Q6UXE8 466 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 GCSAMQ8N6F7 178 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 LRRC20Q8TCA0 184 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TMEM56Q96MV1 263 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TLNRD1Q9H1K6 362 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 SLC25A32Q9H2D1 315 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 NARFLQ9H6Q4 476 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 GLS2Q9UI32 602 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TMED3Q9Y3Q3 217 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TMEM56-RWDD3S4R434 201 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 ABCD4O14678 606 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 CYB5R3P00387 301 aaPredicted RBP9.54□□□□□ -0.88
SCG2-201ENST00000305409 HEXAP06865 529 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 CD80P33681 288 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 CAV2P51636 162 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 HMGN3Q15651 99 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 FAM185AQ8N0U4 392 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 FAM169BQ8N8A8 192 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 MEGF10Q96KG7 1140 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 MS4A7Q9GZW8 240 aaPredicted RBP9.54□□□□□ -0.88
SCG2-201ENST00000305409 RHOFQ9HBH0 211 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 TAS2R3Q9NYW6 316 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 KCNIP1Q9NZI2 227 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 WIPI2Q9Y4P8 454 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 SPEF1Q9Y4P9 236 aa9.54□□□□□ -0.88
SCG2-201ENST00000305409 LRBAP50851 2863 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 IGKV1-39P01597 117 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 IGKV1D-39P04432 117 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 SERPINE2P07093 398 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 UCP1P25874 307 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 RND3P61587 244 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 EIF2S3LQ2VIR3 472 aaKnown RBP9.53□□□□□ -0.88
SCG2-201ENST00000305409 UTF1Q5T230 341 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 ADAM5Q6NVV9 412 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 Q6ZRM9 215 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 CCDC28AQ8IWP9 274 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 DRAM1Q8N682 238 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 BVESQ8NE79 360 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 RNASE11Q8TAA1 199 aaKnown RBP9.53□□□□□ -0.88
SCG2-201ENST00000305409 ARL11Q969Q4 196 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 GALMQ96C23 342 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 C5orf30Q96GV9 206 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 ABHD14BQ96IU4 210 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 TRGV8A0A0C4DH27 118 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 DPRXA6NFQ7 191 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 E5RGE8 158 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 H3BP45 60 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 THBDP07204 575 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 LMO1P25800 156 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
SCG2-201ENST00000305409 EDDM3BP56851 147 aa9.53□□□□□ -0.88
SCG2-201ENST00000305409 CCL8P80075 99 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms