RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 PLA2G3Q9NZ20 509 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ACACAQ13085 2346 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 TRAV39A0A0B4J263 110 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ZNF814B7Z6K7 855 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 F2RP25116 425 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 FKBP2P26885 142 aaKnown RBP11.24□□□□□ -0.61
TRIM35-201ENST00000305364 UCP2P55851 309 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 TRIM61Q5EBN2 209 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 YRDCQ86U90 279 aaKnown RBP11.24□□□□□ -0.61
TRIM35-201ENST00000305364 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 OR4C12Q96R67 309 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 SERTAD4Q9NUC0 356 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ANKRD30BLA7E2S9 258 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 E9PLN8 166 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ZNHIT1O43257 154 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 CD55P08174 381 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 CCL1P22362 96 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 HOXA6P31267 233 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 BRCA2P51587 3418 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
TRIM35-201ENST00000305364 Q6ZS52 159 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ZNF808Q8N4W9 903 aaPredicted RBP11.24□□□□□ -0.61
TRIM35-201ENST00000305364 ZNF586Q9NXT0 402 aa11.24□□□□□ -0.61
TRIM35-201ENST00000305364 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 NPBWR2P48146 333 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 TMEM9BQ9NQ34 198 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 A6NNC1 897 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 KBTBD11O94819 623 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 BCL3P20749 454 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 NUBP1P53384 320 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
TRIM35-201ENST00000305364 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 OR10V1Q8NGI7 309 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 GCM1Q9NP62 436 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 EML5Q05BV3 1969 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 WNT5AP41221 380 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 ZXDAP98168 799 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
TRIM35-201ENST00000305364 LIN7CQ9NUP9 197 aaKnown RBP11.23□□□□□ -0.61
TRIM35-201ENST00000305364 A0A096LPE4 126 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 A0A1W2PPZ6 126 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 GRIFINA4D1Z8 144 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 DEGS1O15121 323 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 SPINK4O60575 86 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 LINC00271P0C7V0 271 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 EGR1P18146 543 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 NTF3P20783 257 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 FOXB1Q99853 325 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 MKRN2OSH3BPM6 223 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 CRISP2P16562 243 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 ZNF816Q0VGE8 651 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 BTNL3Q6UXE8 466 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 PCNX3Q9H6A9 2034 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 SLC22A20A6NK97 555 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 AQP7O14520 342 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 SIAH2O43255 324 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 PGLYRP1O75594 196 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 POU2F2P09086 479 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 EDN3P14138 238 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 MAS1LP35410 378 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 NUFIP2Q7Z417 695 aaKnown RBP11.22□□□□□ -0.61
TRIM35-201ENST00000305364 OR2M3Q8NG83 312 aa11.22□□□□□ -0.61
TRIM35-201ENST00000305364 C20orf202A1L168 122 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 RNF212BA8MTL3 300 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 EFNA2O43921 213 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 CXCL13O43927 109 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 HPRT1P00492 218 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 SLC25A6P12236 298 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 CCL2P13500 99 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 D2HGDHQ8N465 521 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 HINT2Q9BX68 163 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 LRP5LA4QPB2 252 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 SIRPB1O00241 398 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.61
TRIM35-201ENST00000305364 PMCHP20382 165 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 RPL23P62829 140 aaKnown RBP11.21□□□□□ -0.61
TRIM35-201ENST00000305364 TGFBR3Q03167 851 aa11.21□□□□□ -0.61
TRIM35-201ENST00000305364 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms