RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 WASHC3Q9Y3C0 194 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A10PA6NDY2 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A18PA6NE21 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A16PA6NEW6 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A20PA6NIJ5 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A8PA6NJQ4 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A7PA6NKC0 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A22PA8MWA6 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A12PA8MX19 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A5PA8MXJ8 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A23PA8MXZ1 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A15PP0C7V4 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A13PP0C7W8 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A14PP0C7W9 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 FAM90A24PP0C7X0 464 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 NPY1RP25929 384 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 EPHA8P29322 1005 aaPredicted RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 OR2Y1Q8NGV0 311 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF385AQ96PM9 386 aaKnown RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 OR2V2Q96R30 315 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 PIPOXQ9P0Z9 390 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 MPDU1O75352 247 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF83P51522 516 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 CXorf66Q5JRM2 361 aaPredicted RBP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 GLRX2Q9NS18 164 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 K7ERU9 68 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 PRF1P14222 555 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 FGF12P61328 243 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 DDA1Q9BW61 102 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 KNL1Q8NG31 2342 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TRGC1P0CF51 173 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 COL8A1P27658 744 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 LYZP61626 148 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 EFNB1P98172 346 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 SOSTQ9BQB4 213 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 SH3BGRL3Q9H299 93 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TMEM14DPA8MWL7 114 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 DNASE2O00115 360 aaPredicted RBP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 NDUFB4O95168 129 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 IGHV3-13P01766 116 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 IGHV3-7P01780 117 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 CCL3P10147 92 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 MPLP40238 635 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TNFAIP6P98066 277 aaPredicted RBP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 OR52M1Q8NGK5 317 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 RPEQ96AT9 228 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 IGKV1D-42A0A075B6H8 117 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 PRSS1P07477 247 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 OR2D3Q8NGH3 330 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 TAF15Q92804 592 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL3A1-201ENST00000304636 KCNMB2Q9Y691 235 aa11.16□□□□□ -0.62
COL3A1-201ENST00000304636 SMIM10L1P0DMW3 83 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.62
COL3A1-201ENST00000304636 CTHRC1Q96CG8 243 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 SMIM10Q96HG1 83 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 C3orf80F5H4A9 247 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 K7ESF4 209 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 CORTO00230 105 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 SNCGO76070 127 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 CEACAM21Q3KPI0 293 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 ADIPOR1Q96A54 375 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 ATG101Q9BSB4 218 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 TREM2Q9NZC2 230 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 TRAV39A0A0B4J263 110 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 IFITM10A6NMD0 228 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 SIAH2O43255 324 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 SYNGR1O43759 233 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF708P17019 499 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 PERPQ96FX8 193 aa11.15□□□□□ -0.62
COL3A1-201ENST00000304636 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 THY1P04216 161 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 BTCP35070 178 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 SPATA45Q537H7 98 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 GSN-AS1Q9NRJ2 163 aa11.15□□□□□ -0.63
COL3A1-201ENST00000304636 PRRX1P54821 245 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 TMEM187Q14656 261 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 TRPM6Q9BX84 2022 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 SPINK2P20155 84 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 HIKESHIQ53FT3 197 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 ABHD3Q8WU67 409 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 ABHD14AQ9BUJ0 271 aa11.14□□□□□ -0.63
COL3A1-201ENST00000304636 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms