RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 SLC26A1Q9H2B4 701 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 C1RLQ9NZP8 487 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SORL1Q92673 2214 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 LRRK1Q38SD2 2015 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 RBFOX2O43251 390 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 REG1AP05451 166 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ACRP10323 421 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF441Q8N8Z8 693 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CADM4Q8NFZ8 388 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR2A5Q96R48 311 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 GEMIN7Q9H840 131 aaKnown RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 IL23AQ9NPF7 189 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 PRSS21Q9Y6M0 314 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 FEZF1A0PJY2 475 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ITGB1BP1O14713 200 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 IQCF3P0C7M6 154 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 FAM53AQ6NSI3 398 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 PUSL1Q8N0Z8 303 aaKnown RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 BHLHE23Q8NDY6 225 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 MARCH1Q8TCQ1 289 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 NEUROG1Q92886 237 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 NPVFQ9HCQ7 196 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 NXT2Q9NPJ8 142 aaKnown RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ST3GAL6Q9Y274 331 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 H3BQ15 152 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 EBLN2Q6P2I7 272 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 C17orf99Q6UX52 265 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 GFRALQ6UXV0 394 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM91Q6ZNR0 172 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 NKAIN4Q8IVV8 208 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 OR11H7Q8NGC8 314 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 C2CD4CQ8TF44 421 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ERGIC1Q969X5 290 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM45BQ96B21 275 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ZMIZ1Q9ULJ6 1067 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PDCD11Q14690 1871 aaKnown RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 COL11A1P12107 1806 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TRAV39A0A0B4J263 110 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 A0A1W2PNV4 684 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 A0A1W2PR48 441 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TYMSP04818 313 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 GNG3P63215 75 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 IGLV3-21P80748 117 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CLN3Q13286 438 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ZXDCQ2QGD7 858 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM268Q5VZI3 342 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 RPS27LQ71UM5 84 aaKnown RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CA13Q8N1Q1 262 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 SLC25A28Q96A46 364 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ADOQ96SZ5 270 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 RASL11BQ9BPW5 248 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ODAMA1E959 279 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 POM121BA6NF01 834 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 SPNP16150 400 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 SLC38A11Q08AI6 406 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 OLIG2Q13516 323 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PYCR3Q53H96 274 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF648Q5T619 568 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PSENENQ9NZ42 101 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ZSWIM8A7E2V4 1837 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 NDUFB3O43676 98 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 C10orf91Q5T1B1 145 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TCF23Q7RTU1 214 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 BPIFA4PQ86YQ2 179 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 DDB2Q92466 427 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PRDM7Q9NQW5 492 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 HSPB7Q9UBY9 170 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CLDN16Q9Y5I7 305 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 DHHO43323 396 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 NME2P1O60361 137 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 GJB5O95377 273 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 MEIG1Q5JSS6 88 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ATG4DQ86TL0 474 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 OR13C6PQ8NH95 151 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF502Q8TBZ5 544 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 WDR54Q9H977 334 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 ANKRD10Q9NXR5 420 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 JKAMPQ9P055 326 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 IL19Q9UHD0 177 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 H0YL77 283 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 SCRG1O75711 98 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CD5P06127 495 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 WNT2P09544 360 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 FABP2P12104 132 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 RTP5Q14D33 572 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 LINC00696Q6ZRV3 163 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CBLN2Q8IUK8 224 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PNPLA1Q8N8W4 532 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 OR9G4Q8NGQ1 327 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 OR51H1Q8NH63 302 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 CFHR5Q9BXR6 569 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 MS4A6AQ9H2W1 248 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TNFRSF19Q9NS68 423 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TAS2R4Q9NYW5 299 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 PARP14Q460N5 1801 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM272A0A1B0GTI8 110 aa4.62□□□□□ -1.67
SCN1A-201ENST00000303395 RBMY1BA6NDE4 496 aaKnown RBP4.62□□□□□ -1.67
SCN1A-201ENST00000303395 RBMY1EA6NEQ0 496 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms