RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SLC35G3Q8N808 338 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 OR8U1Q8NH10 309 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 DCUN1D4Q92564 292 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 TOLLIPQ9H0E2 274 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 C15orf65H3BRN8 121 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 IFNA7P01567 189 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 SSTR5P35346 364 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 SRPXP78539 464 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 GNMTQ14749 295 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 BEX5Q5H9J7 111 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 ARL11Q969Q4 196 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 SDSLQ96GA7 329 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 DSCAMO60469 2012 aa18.58■□□□□ 0.56
SMAD1-201ENST00000302085 ODAMA1E959 279 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 RP2O75695 350 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 CDS2O95674 445 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 SELLP14151 372 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 IRF2P14316 349 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 F2RP25116 425 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 UCP1P25874 307 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 APOBEC3AP31941 199 aaPredicted RBP18.57■□□□□ 0.56
SMAD1-201ENST00000302085 INO80EQ8NBZ0 244 aaPredicted RBP18.57■□□□□ 0.56
SMAD1-201ENST00000302085 RFESDQ8TAC1 157 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 RRNAD1Q96FB5 475 aaKnown RBP18.57■□□□□ 0.56
SMAD1-201ENST00000302085 AKR1E2Q96JD6 320 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 CNTNAP3BQ96NU0 1288 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 CNTNAP3Q9BZ76 1288 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 RBM7Q9Y580 266 aaKnown RBP18.57■□□□□ 0.56
SMAD1-201ENST00000302085 A0A1B0GW55 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L2P0CJ85 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L3P0CJ86 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L4P0CJ87 422 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L5P0CJ88 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L6P0CJ89 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L7P0CJ90 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 CR1LQ2VPA4 569 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 FAM209AQ5JX71 171 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 TEX36Q5VZQ5 186 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4L9Q6RFH8 374 aaPredicted RBP18.57■□□□□ 0.56
SMAD1-201ENST00000302085 ZNF561Q8N587 486 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 OR1S1Q8NH92 325 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 LRRC46Q96FV0 321 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 DUX4Q9UBX2 424 aa18.57■□□□□ 0.56
SMAD1-201ENST00000302085 H0Y980 276 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 S100GP29377 79 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 S100A10P60903 97 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 TRAT1Q6PIZ9 186 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 ZNF695Q8IW36 515 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 GAFA1Q96PS6 74 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 EGLN1Q9GZT9 426 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 TMED3Q9Y3Q3 217 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 RNF115Q9Y4L5 304 aa18.56■□□□□ 0.56
SMAD1-201ENST00000302085 TUBAL3A6NHL2 446 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 GYPAP02724 150 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 MUC1P15941 1255 aaPredicted RBP18.55■□□□□ 0.56
SMAD1-201ENST00000302085 P2RX3P56373 397 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 EFNB3Q15768 340 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 CCL13Q99616 98 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 UBQLN2Q9UHD9 624 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 TPRP12270 2363 aaKnown RBP18.55■□□□□ 0.56
SMAD1-201ENST00000302085 WNT2P09544 360 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 GZMHP20718 246 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 PPP1CCP36873 323 aaKnown RBP18.55■□□□□ 0.56
SMAD1-201ENST00000302085 TFF3Q07654 80 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 FOXRED2Q8IWF2 684 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 OR8H3Q8N146 312 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 OR5D13Q8NGL4 314 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 OR51H1Q8NH63 302 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 SAP30LQ9HAJ7 183 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 CISD1Q9NZ45 108 aaKnown RBP18.55■□□□□ 0.56
SMAD1-201ENST00000302085 RNF150Q9ULK6 438 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 KCNS2Q9ULS6 477 aa18.55■□□□□ 0.56
SMAD1-201ENST00000302085 ITPR1Q14643 2758 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 LRRC30A6NM36 301 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 SPINT2O43291 252 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 MBPP02686 304 aaPredicted RBP18.54■□□□□ 0.56
SMAD1-201ENST00000302085 LOXP28300 417 aaPredicted RBP18.54■□□□□ 0.56
SMAD1-201ENST00000302085 ZNF788Q6ZQV5 615 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 SLC51BQ86UW2 128 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 DRAM1Q8N682 238 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 OR52M1Q8NGK5 317 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 DYNLRB1Q9NP97 96 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 OR2S2Q9NQN1 319 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 DIDO1Q9BTC0 2240 aaKnown RBP18.54■□□□□ 0.56
SMAD1-201ENST00000302085 PKD1L2Q7Z442 2459 aa18.54■□□□□ 0.56
SMAD1-201ENST00000302085 IGHV3-43A0A0B4J1X8 118 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 BCL2L11O43521 198 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 IGHV3-43DP0DP04 118 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 EDDM3BP56851 147 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 HTD2P86397 168 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 NCOR1P1Q9H4R4 102 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 ZNF665Q9H7R5 613 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 MSGN1A6NI15 193 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 B9A039 149 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 PET100P0DJ07 73 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 NINJ1Q92982 152 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 MS4A5Q9H3V2 200 aa18.53■□□□□ 0.56
SMAD1-201ENST00000302085 KANTRA0A1W2PQU2 76 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 DEFB108AA8MXU0 73 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 DEDDO75618 318 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms