RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 AMTP48728 403 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 ZNF133P52736 654 aaPredicted RBP12.39□□□□□ -0.43
CDT1-201ENST00000301019 TPPP2P59282 170 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 UBE2V1Q13404 147 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 RPP25Q9BUL9 199 aaKnown RBP12.39□□□□□ -0.43
CDT1-201ENST00000301019 HSPB2A8KAH6 182 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 F6UZH7 168 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 MDH2P40926 338 aaKnown RBP12.39□□□□□ -0.43
CDT1-201ENST00000301019 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
CDT1-201ENST00000301019 MSMO1Q15800 293 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 HSPB2Q16082 182 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 GABRG3Q99928 467 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 CCL28Q9NRJ3 127 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 ASPMQ8IZT6 3477 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 SVILO95425 2214 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 A8MXE2 369 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 IER3P46695 156 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 PPP1CBP62140 327 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 GABREP78334 506 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 COA6Q5JTJ3 125 aaKnown RBP12.38□□□□□ -0.43
CDT1-201ENST00000301019 HLA-DQA1Q5Y7H0 255 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 ZNF818PQ6ZRF7 136 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 H1FOOQ8IZA3 346 aaPredicted RBP12.38□□□□□ -0.43
CDT1-201ENST00000301019 CTDSP1Q9GZU7 261 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 HYPMO75409 117 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 TCL1AP56279 114 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.38□□□□□ -0.43
CDT1-201ENST00000301019 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
CDT1-201ENST00000301019 SIGLECL1Q8N7X8 197 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 FLVCR1-AS1Q8TAF5 88 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
CDT1-201ENST00000301019 BCL2L2Q92843 193 aaPredicted RBP12.38□□□□□ -0.43
CDT1-201ENST00000301019 TRDCB7Z8K6 153 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 KBTBD11O94819 623 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 NDUFB4O95168 129 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 NAPSAO96009 420 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 CRYABP02511 175 aaKnown RBP12.37□□□□□ -0.43
CDT1-201ENST00000301019 KCNIP4Q6PIL6 250 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
CDT1-201ENST00000301019 CLUHP3Q96NS8 147 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 IGKV1D-13A0A0B4J2D9 117 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 PPYP01298 95 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 IGKV1-13P0DP09 117 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 SOX8P57073 446 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 TCTAP57738 103 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 ZNF738Q8NE65 137 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 TIMM29Q9BSF4 260 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 WIPI2Q9Y4P8 454 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 B4DGG1 531 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 PSMB3P49720 205 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 PDLIM4P50479 330 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 GCSAMLQ5JQS6 135 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 OOSP2Q86WS3 158 aa12.37□□□□□ -0.43
CDT1-201ENST00000301019 NAA38Q9BRA0 125 aaKnown RBP12.37□□□□□ -0.43
CDT1-201ENST00000301019 H0Y8G0 127 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 FCN1O00602 326 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 SAP30O75446 220 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 SHBQ15464 509 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 SOHLH2Q9NX45 425 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 TBL2Q9Y4P3 447 aaKnown RBP12.36□□□□□ -0.43
CDT1-201ENST00000301019 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
CDT1-201ENST00000301019 SCTP09683 121 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 ATP5G3P48201 142 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 PAX9P55771 341 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 GFRA1P56159 465 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 LINC00310P59036 64 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 ZNF90Q03938 601 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 MYBPHQ13203 477 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 MRGPRGQ86SM5 289 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 SELENOHQ8IZQ5 122 aaKnown RBP12.36□□□□□ -0.43
CDT1-201ENST00000301019 STPG3Q8N7X2 389 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 OR2V1Q8NHB1 315 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 BAHD1Q8TBE0 780 aaPredicted RBP12.36□□□□□ -0.43
CDT1-201ENST00000301019 ASB10Q8WXI3 467 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 OR4C12Q96R67 309 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 C2orf16Q68DN1 1984 aa12.36□□□□□ -0.43
CDT1-201ENST00000301019 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
CDT1-201ENST00000301019 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 Q6ZRM9 215 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 ANAPC10Q9UM13 185 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 TCN2P20062 427 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms