RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TMEM187Q14656 261 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 SP6Q3SY56 376 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 LGI3Q8N145 548 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 BVESQ8NE79 360 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 GRPEL2Q8TAA5 225 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 C14orf79Q96F83 325 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 AKR1E2Q96JD6 320 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 NMES1Q9C002 83 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 TOLLIPQ9H0E2 274 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 OR2S2Q9NQN1 319 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 CBLN4Q9NTU7 201 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 HOXB5P09067 269 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 LRTM2Q8N967 370 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM246Q9BRR3 403 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
HERPUD1-201ENST00000300302 ROS1P08922 2347 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 ATP6V1G1O75348 118 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 B3GALNT1O75752 331 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 OR8U9P0C7N5 309 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 SELLP14151 372 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 OR52L2PQ8NGH6 319 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 OR8U1Q8NH10 309 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 KCNS2Q9ULS6 477 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 UBE2J1Q9Y385 318 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 TANC2Q9HCD6 1990 aa13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-201ENST00000300302 TRGV10A0A0A0MS01 117 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 HMSDA8MTL9 139 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DSCAMO60469 2012 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 PGLYRP1O75594 196 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 PPP1R1CQ8WVI7 109 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 C2orf50Q96LR7 162 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 TP53RKQ96S44 253 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 A0A1B0GW55 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 NDUFA2O43678 99 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L2P0CJ85 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L3P0CJ86 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L4P0CJ87 422 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L5P0CJ88 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L6P0CJ89 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L7P0CJ90 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 C4BPBP20851 252 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4L9Q6RFH8 374 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 FAM216AQ8WUB2 273 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 DUX4Q9UBX2 424 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 SLC25A10Q9UBX3 287 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 JPT1Q9UK76 154 aa13.06□□□□□ -0.32
HERPUD1-201ENST00000300302 KIAA2026Q5HYC2 2103 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 H0Y980 276 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 IGFBP2P18065 325 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 LGALSLQ3ZCW2 172 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 LRRC37A5PQ49AS3 106 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 THAP6Q8TBB0 222 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 EDARADDQ8WWZ3 215 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 GON7Q9BXV9 100 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 SLA2Q9H6Q3 261 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 GNG12Q9UBI6 72 aa13.05□□□□□ -0.32
HERPUD1-201ENST00000300302 TRAV14DV4A0A0A6YYC5 116 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 MEX3AA1L020 520 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 TNFSF12O43508 249 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 NDUFB7P17568 137 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 F2RP25116 425 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 PSMB6P28072 239 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 PPP1CCP36873 323 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 GNMTQ14749 295 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 GGNBP1Q5YKI7 109 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 ZNF645Q8N7E2 425 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 OR10C1Q96KK4 312 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 PARP12Q9H0J9 701 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 KBTBD11-OT1A0A1B0GTJ5 212 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 hADV38S2A0JD32 116 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 RNF212BA8MTL3 300 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 L7N2F9 121 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 F2RL2O00254 374 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 ARPC5O15511 151 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 ADAM20O43506 726 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 NDUFB3O43676 98 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 FSTL3O95633 263 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 IGLV2-14P01704 120 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 WNT2P09544 360 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 SLC25A4P12235 298 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms