RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PRSS50Q9UI38 385 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 DTYMKP23919 212 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 MEOX1P50221 254 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 TIPARPQ7Z3E1 657 aaKnown RBP11.45□□□□□ -0.58
CASC4-201ENST00000299957 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 IGKV1D-13A0A0B4J2D9 117 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 WIPF3A6NGB9 483 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 CD63P08962 238 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 CST2P09228 141 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 DANCRP0C864 163 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 IGKV1-13P0DP09 117 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 ZNF17P17021 662 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 F2RP25116 425 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 PCOLCEQ15113 449 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 UHRF2Q96PU4 802 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
CASC4-201ENST00000299957 IGKV1-12A0A0C4DH73 117 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 F8VVB4 439 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 F8VWA3 439 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 IGKV1D-12P01611 117 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 KRTDAPP60985 99 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
CASC4-201ENST00000299957 RTP5Q14D33 572 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 OR52L2PQ8NGH6 319 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 OR5D13Q8NGL4 314 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 TMEM68Q96MH6 324 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 CDS2O95674 445 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 THBS3P49746 956 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 ZNF83P51522 516 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 OR2W1Q9Y3N9 320 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 TRGV5A0A0B4J1U4 118 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 LDLRAD4O15165 306 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 GAPDHP04406 335 aaKnown RBP11.44□□□□□ -0.58
CASC4-201ENST00000299957 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 PLGLAQ15195 96 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 NFAM1Q8NET5 270 aaPredicted RBP11.44□□□□□ -0.58
CASC4-201ENST00000299957 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 FAM173AQ9BQD7 235 aa11.44□□□□□ -0.58
CASC4-201ENST00000299957 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 CLN5O75503 358 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 MDP1Q86V88 176 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 ZNF439Q8NDP4 499 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 LEAP2Q969E1 77 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 MOB3AQ96BX8 217 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 LRFN3Q9BTN0 628 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 Q9N2K0 584 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 IGHV3OR15-7A0A075B7D8 119 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 IGHV1-45A0A0A0MS14 117 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 M0R1B8 84 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 VKORC1L1Q8N0U8 176 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 LILRB1Q8NHL6 650 aaPredicted RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 MUCL1Q96DR8 90 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 RIMS4Q9H426 269 aaPredicted RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 GSN-AS1Q9NRJ2 163 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 KIAA1671Q9BY89 1806 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 PGLYRP1O75594 196 aaPredicted RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 IL24Q13007 206 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 HABP2Q14520 560 aaPredicted RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 MT-CO2P00403 227 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 PMCHP20382 165 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 PPP1CBP62140 327 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 BTF3L4Q96K17 158 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 ZMAT5Q9UDW3 170 aaKnown RBP11.43□□□□□ -0.58
CASC4-201ENST00000299957 AUP1Q9Y679 476 aa11.43□□□□□ -0.58
CASC4-201ENST00000299957 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 PCNX2A6NKB5 2137 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 TMEM11P17152 192 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 OR1L1Q8NH94 360 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 MRPL30Q8TCC3 161 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 FER1L6-AS2Q96M78 137 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 GTF3C1Q12789 2109 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 IGKV1-27A0A075B6S5 117 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 F6UZH7 168 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 IGHMP01871 453 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 OR5G3P0C626 314 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 RPS2P15880 293 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 MDH2P40926 338 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 CPEB3Q8NE35 698 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 SLC25A40Q8TBP6 338 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 BOD1Q96IK1 185 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 CARHSP1Q9Y2V2 147 aaKnown RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 WNT9BO14905 357 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms