RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SLC25A53Q5H9E4 307 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 ANKRD37Q7Z713 158 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 IL36RNQ9UBH0 155 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 FER1L5A0AVI2 2057 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 H0Y980 276 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 EDN3P14138 238 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 F2RP25116 425 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 FUT6P51993 359 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 RPS16P62249 146 aaKnown RBP11.13□□□□□ -0.63
TVP23A-201ENST00000299866 SERF2P84101 59 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 ZNF468Q5VIY5 522 aaPredicted RBP11.13□□□□□ -0.63
TVP23A-201ENST00000299866 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 PSMG3Q9BT73 122 aaPredicted RBP11.13□□□□□ -0.63
TVP23A-201ENST00000299866 WDR61Q9GZS3 305 aaKnown RBP11.13□□□□□ -0.63
TVP23A-201ENST00000299866 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 TNFSF10P50591 281 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 HBG1P69891 147 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 HBG2P69892 147 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 Q6ZSR3 168 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 FGF21Q9NSA1 209 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 TCF21O43680 179 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 PAGE4O60829 102 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 DEFA4P12838 97 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 BCL3P20749 454 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 TCF23Q7RTU1 214 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 MANBALQ9NQG1 85 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 DIDO1Q9BTC0 2240 aaKnown RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 TP53I11O14683 189 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 IL1F10Q8WWZ1 152 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 TMEM54Q969K7 222 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 RASL10BQ96S79 203 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 PATZ1Q9HBE1 687 aaKnown RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 MRPS18CQ9Y3D5 142 aaKnown RBP11.12□□□□□ -0.63
TVP23A-201ENST00000299866 WDR87Q6ZQQ6 2873 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 TRANK1O15050 2925 aa11.12□□□□□ -0.63
TVP23A-201ENST00000299866 G3V3Y1 287 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 B4GALT1P15291 398 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 ZNF32P17041 273 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 DRD1P21728 446 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CRYGSP22914 178 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CFHR1Q03591 330 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 ZCCHC14Q8WYQ9 949 aaKnown RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 ERRFI1Q9UJM3 462 aaPredicted RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 S100GP29377 79 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 BRS3P32247 399 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 ACSM6Q6P461 480 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CENPVQ7Z7K6 275 aaPredicted RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CABIN1Q9Y6J0 2220 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 A0A1W2PPC4 97 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 TRAPPC6AO75865 159 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CRYAAP02489 173 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 SLC38A11Q08AI6 406 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 TRA2AQ13595 282 aaKnown RBP eCLIP11.11□□□□□ -0.63
TVP23A-201ENST00000299866 RAET1LQ5VY80 246 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 CMTM2Q8TAZ6 248 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 PPP1R3CQ9UQK1 317 aa11.11□□□□□ -0.63
TVP23A-201ENST00000299866 ZNF816-ZNF321PA0A0X1KG74 233 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 TOX3O15405 576 aaPredicted RBP11.1□□□□□ -0.63
TVP23A-201ENST00000299866 SYNGR3O43761 229 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 UBALD1Q8TB05 177 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 GPR27Q9NS67 375 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 PPIAL4AQ9Y536 164 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 PGPEP1LA6NFU8 196 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 SIAH2O43255 324 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 GNG10P50151 68 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 CCR5P51681 352 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 PPP1CBP62140 327 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 GAGE1Q13065 139 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 FAM27BQ5VT28 67 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 PRR18Q8N4B5 295 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
TVP23A-201ENST00000299866 TRAV39A0A0B4J263 110 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 TUSC2O75896 110 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 CLDN1O95832 211 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 ESPL1Q14674 2120 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 HLA-BQ31612 363 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms