RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 IP6K3Q96PC2 410 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 ZNF665Q9H7R5 613 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
SCN3B-201ENST00000299333 ANKRD36CQ5JPF3 1778 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 HIST1H2BAQ96A08 127 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 SLC26A1Q9H2B4 701 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 FOLR2P14207 255 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 FCARP24071 287 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 GALNSP34059 522 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 OR10W1Q8NGF6 305 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 CXXC4Q9H2H0 198 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 TRGV5A0A0B4J1U4 118 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 ELSPBP1Q96BH3 223 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 A8MWL6 223 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 MYOGP15173 224 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 C16orf47Q6ZP98 133 aaPredicted RBP13□□□□□ -0.33
SCN3B-201ENST00000299333 TOX2Q96NM4 488 aa13□□□□□ -0.33
SCN3B-201ENST00000299333 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
SCN3B-201ENST00000299333 C1QTNF9BB2RNN3 333 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 CTSVO60911 334 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 CT62P0C5K7 136 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-201ENST00000299333 ID4P47928 161 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 SERF2P84101 59 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 ROM1Q03395 351 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 NINQ8N4C6 2090 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 LYZL6O75951 148 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 PEX11BO96011 259 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 MEF2BQ02080 365 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-201ENST00000299333 KIAA1644Q3SXP7 199 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 MPC1Q9Y5U8 109 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 HLA-DQA1P01909 254 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 SRIP30626 198 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 Q8WTZ3 238 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 PTPMT1Q8WUK0 201 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-201ENST00000299333 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
SCN3B-201ENST00000299333 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 ZNF735P0CB33 412 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 CKS2P33552 79 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 LGALS7P47929 136 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 RNPS1Q15287 305 aaKnown RBP12.99□□□□□ -0.33
SCN3B-201ENST00000299333 C1QL3Q5VWW1 255 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 FLRT3Q9NZU0 649 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 TRAV8-2A0A0B4J237 113 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 TYMSP04818 313 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 TMEM211Q6ICI0 200 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 OR4C13Q8NGP0 309 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 IL36RNQ9UBH0 155 aa12.99□□□□□ -0.33
SCN3B-201ENST00000299333 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 GAPDHP04406 335 aaKnown RBP12.98□□□□□ -0.33
SCN3B-201ENST00000299333 AMY1AP04745 511 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 FOXC2Q99958 501 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 ZPBPQ9BS86 351 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 SERTM1A2A2V5 107 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PPIHO43447 177 aaKnown RBP12.98□□□□□ -0.33
SCN3B-201ENST00000299333 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 CCR5P51681 352 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 FXYD3Q14802 87 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 Q6ZNB5 142 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 VCX2Q9H322 139 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PRSS2P07478 247 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 FCGR3AP08637 254 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PNLIPP16233 465 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 LINC01555Q8NAE3 123 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 TUBD1Q9UJT1 453 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 CDIPTO14735 213 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
SCN3B-201ENST00000299333 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 VSTM2LQ96N03 204 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 OR2A4O95047 310 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 PRSS8Q16651 343 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-201ENST00000299333 TMEM252Q8N6L7 170 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 OR6X1Q8NH79 312 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 OR2A7Q96R45 310 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 TMPRSS2O15393 492 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 TNFSF15O95150 251 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 MRPL16Q9NX20 251 aaKnown RBP12.97□□□□□ -0.33
SCN3B-201ENST00000299333 MRPS18BQ9Y676 258 aaKnown RBP12.97□□□□□ -0.33
SCN3B-201ENST00000299333 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-201ENST00000299333 C7orf71A4D174 169 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 MPTX1A8MV57 137 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 HKR1P10072 659 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 AGAP20933 346 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 JOSD1Q15040 202 aaPredicted RBP12.97□□□□□ -0.33
SCN3B-201ENST00000299333 MYO5AQ9Y4I1 1855 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms