RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RND3P61587 244 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 TCF15Q12870 199 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 SWI5Q1ZZU3 235 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 C22orf34Q6ZV56 151 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 GINS3Q9BRX5 216 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
RHO-201ENST00000296271 PURGQ9UJV8 347 aaKnown RBP9.92□□□□□ -0.82
RHO-201ENST00000296271 IGHV1-18A0A0C4DH31 117 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 DEFB108AA8MXU0 73 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ATXN7O15265 892 aaPredicted RBP9.91□□□□□ -0.82
RHO-201ENST00000296271 IGKV1-5P01602 117 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 CD5P06127 495 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 DANCRP0C864 163 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 VDAC1P21796 283 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ATP6V0CP27449 155 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 OR3A1P47881 315 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 CAMLGP49069 296 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 MRPL49Q13405 166 aaKnown RBP9.91□□□□□ -0.82
RHO-201ENST00000296271 SRSF7Q16629 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
RHO-201ENST00000296271 LTC4SQ16873 150 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ZNF585BQ52M93 769 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 C10orf91Q5T1B1 145 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 IL34Q6ZMJ4 242 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ZNF808Q8N4W9 903 aaPredicted RBP9.91□□□□□ -0.82
RHO-201ENST00000296271 FAM213BQ8TBF2 198 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 CABLES2Q9BTV7 478 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 H0Y980 276 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 AQP7O14520 342 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
RHO-201ENST00000296271 RAMP3O60896 148 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 CBR1P16152 277 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 COX5AP20674 150 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ID3Q02535 119 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 GPR157Q5UAW9 335 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 INO80CQ6PI98 192 aaPredicted RBP9.91□□□□□ -0.82
RHO-201ENST00000296271 BTNL3Q6UXE8 466 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 FAM185AQ8N0U4 392 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 SVBPQ8N300 66 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 MRGPRDQ8TDS7 321 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 RARRES2Q99969 163 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 BCL2L14Q9BZR8 327 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 PARP11Q9NR21 331 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 FBXO7Q9Y3I1 522 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 RNF115Q9Y4L5 304 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 PKDREJQ9NTG1 2253 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 ZZEF1O43149 2961 aa9.91□□□□□ -0.82
RHO-201ENST00000296271 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 KIAA1324LA8MWY0 1029 aaPredicted RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 TXNL1O43396 289 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 TSPAN15O95858 294 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 SERPINE2P07093 398 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 DAOP14920 347 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 CD82P27701 267 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 SSTR5P35346 364 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 GLIPR1P48060 266 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 ZNF83P51522 516 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 RPL30P62888 115 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 EIF5AP63241 154 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 ZNF146Q15072 292 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 VHLLQ6RSH7 139 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 WDR82Q6UXN9 313 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 OR8G5Q8NG78 346 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 OR5D13Q8NGL4 314 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 COQ2Q96H96 371 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 C19orf12Q9NSK7 152 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 FAM212BQ9NTI7 297 aaPredicted RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 CACNG5Q9UF02 275 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 IGHV2OR16-5A0A0B4J2B6 119 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 PRR33A8MZF0 331 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 C12orf77C9JDV5 145 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 SH2D1BO14796 132 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 HOXC12P31275 282 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 F2RL1P55085 397 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 VAMP2P63027 116 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 UTF1Q5T230 341 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 RNASE11Q8TAA1 199 aaKnown RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 POM121Q96HA1 1249 aa9.9□□□□□ -0.82
RHO-201ENST00000296271 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 ZNF71Q9NQZ8 489 aaPredicted RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 LYRM2Q9NU23 88 aaPredicted RBP9.9□□□□□ -0.82
RHO-201ENST00000296271 CUL9Q8IWT3 2517 aa9.9□□□□□ -0.83
RHO-201ENST00000296271 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
RHO-201ENST00000296271 CGAP01215 116 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 HEXAP06865 529 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 EGR1P18146 543 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 SNCAP37840 140 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
RHO-201ENST00000296271 FAM201AQ5SY85 155 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms