RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 H0YIZ8 118 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 SMIM10L1P0DMW3 83 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 CCL8P80075 99 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 FBXW9Q5XUX1 488 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 ZNF385CQ66K41 422 aaPredicted RBP11.67□□□□□ -0.54
HPS3-201ENST00000296051 SMIM10Q96HG1 83 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 RLFQ13129 1914 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 RNF224P0DH78 156 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 FAM3AP98173 230 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 SLC38A11Q08AI6 406 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 IQCJQ1A5X6 159 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 ZNF385AQ96PM9 386 aaKnown RBP11.66□□□□□ -0.54
HPS3-201ENST00000296051 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 ADH4P08319 380 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 VAX1Q5SQQ9 334 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 C1orf185Q5T7R7 199 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 TGFBR3LH3BV60 316 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 DEDDO75618 318 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 C1QL2Q7Z5L3 287 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 OR10A7Q8NGE5 316 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 ZNF721Q8TF20 911 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 OR7C2O60412 319 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 FSTP19883 344 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 CEBPEQ15744 281 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 CMTM2Q8TAZ6 248 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 ABHD17AQ96GS6 310 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 PRSS50Q9UI38 385 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 DOCK9Q9BZ29 2069 aa11.66□□□□□ -0.54
HPS3-201ENST00000296051 M0R1X1 148 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 CST2P09228 141 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 KLRB1Q12918 225 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 GAMTQ14353 236 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 PRR27Q6MZM9 219 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
HPS3-201ENST00000296051 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 CLCF1Q9UBD9 225 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 ZNF17P17021 662 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 RND3P61587 244 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 FOXO1Q12778 655 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 OR4A4PQ8NGN8 299 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 PTX4Q96A99 478 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 IGHV1-45A0A0A0MS14 117 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 VDAC1P21796 283 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 NUFIP2Q7Z417 695 aaKnown RBP11.65□□□□□ -0.54
HPS3-201ENST00000296051 MOGAT3Q86VF5 341 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
HPS3-201ENST00000296051 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.55
HPS3-201ENST00000296051 PTBP3O95758 552 aaKnown RBP11.65□□□□□ -0.55
HPS3-201ENST00000296051 OR5G3P0C626 314 aa11.65□□□□□ -0.55
HPS3-201ENST00000296051 OR2T10Q8NGZ9 312 aa11.65□□□□□ -0.55
HPS3-201ENST00000296051 MRGPRFQ96AM1 343 aa11.65□□□□□ -0.55
HPS3-201ENST00000296051 GMPPAQ96IJ6 420 aaPredicted RBP11.65□□□□□ -0.55
HPS3-201ENST00000296051 SF3B5Q9BWJ5 86 aaKnown RBP11.65□□□□□ -0.55
HPS3-201ENST00000296051 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.55
HPS3-201ENST00000296051 A0A1W2PQD3 144 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 TMEM30CPA0ZSE6 113 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 OPN1MWP04001 364 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 OPN1MW2P0DN77 364 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 OPN1MW3P0DN78 364 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 ARL16Q0P5N6 197 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 CLEC2AQ6UVW9 174 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 FAM214BQ7L5A3 538 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 LIN7CQ9NUP9 197 aaKnown RBP11.64□□□□□ -0.55
HPS3-201ENST00000296051 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 CDIPTO14735 213 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 EIF4E3Q8N5X7 224 aaKnown RBP11.64□□□□□ -0.55
HPS3-201ENST00000296051 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 RNF126Q9BV68 326 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 PATJQ8NI35 1801 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 WDR87Q6ZQQ6 2873 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 MS4A18H0YCH9 400 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 CEACAM6P40199 344 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 ERHP84090 104 aaKnown RBP11.64□□□□□ -0.55
HPS3-201ENST00000296051 MS4A18Q3C1V0 323 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 Q3ZCU0 254 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 DOCK10Q96BY6 2186 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 PSME4Q14997 1843 aa11.64□□□□□ -0.55
HPS3-201ENST00000296051 TRAV38-1A0A0B4J264 116 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 CBY3A6NI87 242 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 SYNGR2O43760 224 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 GPR6P46095 362 aaPredicted RBP11.63□□□□□ -0.55
HPS3-201ENST00000296051 ERVFC1-1P60608 527 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms