RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HAX1O00165 279 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 RLN1P04808 185 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 ANXA7P20073 488 aaKnown RBP12.48□□□□□ -0.41
CCDC140-201ENST00000295226 CBX5P45973 191 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 DLX1P56177 255 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
CCDC140-201ENST00000295226 ACTBL2Q562R1 376 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
CCDC140-201ENST00000295226 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
CCDC140-201ENST00000295226 RFESDQ8TAC1 157 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 Q9N2K0 584 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 PLSCR3Q9NRY6 295 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 MGAT4AQ9UM21 535 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 PPIAL4CA0A0B4J2A2 164 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 CA11O75493 328 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 AMY2AP04746 511 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 HEXAP06865 529 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 OMGP23515 440 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 SSTR5P35346 364 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 PAX5Q02548 391 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 LTC4SQ16873 150 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 LAMTOR1Q6IAA8 161 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 SEC22CQ9BRL7 303 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
CCDC140-201ENST00000295226 ACANP16112 2415 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 ABCA1O95477 2261 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 hADV38S2A0JD32 116 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 FOXH1O75593 365 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 RGS11O94810 467 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 OR2A4O95047 310 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 SCTP09683 121 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 PAX2Q02962 417 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF880Q6PDB4 577 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 IDO2Q6ZQW0 420 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 OR4D10Q8NGI6 311 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 OR2T35Q8NGX2 323 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 OR1L1Q8NH94 360 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 OR2A7Q96R45 310 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 RIMS4Q9H426 269 aaPredicted RBP12.47□□□□□ -0.41
CCDC140-201ENST00000295226 TAF9BQ9HBM6 251 aa12.47□□□□□ -0.41
CCDC140-201ENST00000295226 TRBV6-6A0A0A6YYG2 114 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 A8MXK9 166 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 C12orf77C9JDV5 145 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 SMLR1H3BR10 107 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 GPR37O15354 613 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 MMP23AO75900 390 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF735P0CB33 412 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ARF6P62330 175 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 MEF2CQ06413 473 aaPredicted RBP12.46□□□□□ -0.41
CCDC140-201ENST00000295226 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 UTF1Q5T230 341 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ZDHHC22Q8N966 263 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF565Q8N9K5 539 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 LY6G5BQ8NDX9 201 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 MSI2Q96DH6 328 aaKnown RBP12.46□□□□□ -0.41
CCDC140-201ENST00000295226 TMPRSS13Q9BYE2 586 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
CCDC140-201ENST00000295226 OR6C3Q9NZP0 311 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ONECUT1Q9UBC0 465 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 ANAPC10Q9UM13 185 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 LINC00312Q9Y6C7 94 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 CSPG4Q6UVK1 2322 aa12.46□□□□□ -0.41
CCDC140-201ENST00000295226 SVEP1Q4LDE5 3571 aa12.46□□□□□ -0.42
CCDC140-201ENST00000295226 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 C15orf65H3BRN8 121 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 CGB3P0DN86 165 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 CGB7P0DN87 165 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 VSIG10L2P0DP72 767 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 NAT1P18440 290 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 DTYMKP23919 212 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 DHODHQ02127 395 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 Q5BKY6 102 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 FAHD2BQ6P2I3 314 aaPredicted RBP12.45□□□□□ -0.42
CCDC140-201ENST00000295226 HOGA1Q86XE5 327 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 CORO2AQ92828 525 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 FAHD2AQ96GK7 314 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC140-201ENST00000295226 IGHV2-70DA0A0C4DH43 119 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 B4DSR2 109 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 HBZP02008 142 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 MSMBP08118 114 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 ZNF728P0DKX0 622 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 DLX6P56179 175 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 CR1LQ2VPA4 569 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms