RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 RNASE11Q8TAA1 199 aaKnown RBP11.78□□□□□ -0.52
NXF1-201ENST00000294172 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 TMEM231Q9H6L2 316 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
NXF1-201ENST00000294172 MMP26Q9NRE1 261 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 ICE1Q9Y2F5 2266 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 ATP6V1G2-DDX39BF2Z307 99 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 TOR1AO14656 332 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 GABRA2P47869 451 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 SULT1A2P50226 295 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 VAMP2P63027 116 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
NXF1-201ENST00000294172 HMGN3Q15651 99 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 TIMM23BQ5SRD1 257 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 FAM180AQ6UWF9 173 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 TPRX1Q8N7U7 411 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 MUCL1Q96DR8 90 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
NXF1-201ENST00000294172 TLNRD1Q9H1K6 362 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
NXF1-201ENST00000294172 A0A0G2JRQ6 117 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 AGPAT2O15120 278 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 HEXAP06865 529 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 ID4P47928 161 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 CLINT1Q14677 625 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 SMIM21Q3B7S5 101 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 FAM169BQ8N8A8 192 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 HSD17B11Q8NBQ5 300 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 LRRC29Q8WV35 223 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 IL22RA2Q969J5 263 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 TREM1Q9NP99 234 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 RNF150Q9ULK6 438 aa11.77□□□□□ -0.52
NXF1-201ENST00000294172 C12orf77C9JDV5 145 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 WRBO00258 174 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 CRYAAP02489 173 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 BMP5P22003 454 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 LMO1P25800 156 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 IL2RGP31785 369 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 COL10A1Q03692 680 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 FOXC1Q12948 553 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
NXF1-201ENST00000294172 MRGPRDQ8TDS7 321 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 GALMQ96C23 342 aa11.77□□□□□ -0.53
NXF1-201ENST00000294172 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 F8W036 122 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 TIMP3P35625 211 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 EIF2S3LQ2VIR3 472 aaKnown RBP11.76□□□□□ -0.53
NXF1-201ENST00000294172 KRTCAP3Q53RY4 240 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 Q6ZRG5 221 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 OR52L2PQ8NGH6 319 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 GPR146Q96CH1 333 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 COQ2Q96H96 371 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 AKR1E2Q96JD6 320 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 CLEC18AA5D8T8 446 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 C1QTNF9BB2RNN3 333 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 CHST1O43916 411 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 ID3Q02535 119 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 FAM27E3Q08E93 113 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 KRBOX4Q5JUW0 171 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 IL34Q6ZMJ4 242 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 C1orf174Q8IYL3 243 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 PUSL1Q8N0Z8 303 aaKnown RBP11.76□□□□□ -0.53
NXF1-201ENST00000294172 SVBPQ8N300 66 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 DRAM1Q8N682 238 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 CLEC18CQ8NCF0 446 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 FAM57AQ8TBR7 257 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 PLEKHF2Q9H8W4 249 aa11.76□□□□□ -0.53
NXF1-201ENST00000294172 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
NXF1-201ENST00000294172 NUDT19A8MXV4 375 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CST7O76096 145 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 TMEM50AO95807 157 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 HBZP02008 142 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CTRB1P17538 263 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 GLIPR1P48060 266 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 TMEM217Q8N7C4 229 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 SFXN3Q9BWM7 321 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 ARV1Q9H2C2 271 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
NXF1-201ENST00000294172 TP53TG5Q9Y2B4 290 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 SPRY3O43610 288 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms