RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 TMEM222Q9H0R3 208 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
PTCD1-201ENST00000292478 F2RL2O00254 374 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 IGKV3-11P04433 115 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
PTCD1-201ENST00000292478 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
PTCD1-201ENST00000292478 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 IGHV3-13P01766 116 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 IGHV3-7P01780 117 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SPNS3Q6ZMD2 512 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 DYRK2Q92630 601 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 TMEM229AB2RXF0 380 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SSX7Q7RTT5 188 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 ABHD14AQ9BUJ0 271 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 MSL2Q9HCI7 577 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.63
PTCD1-201ENST00000292478 J3QR06 171 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 VAMP3Q15836 100 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 C10orf128Q5T292 105 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 OR1K1Q8NGR3 316 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 OR51B2Q9Y5P1 312 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 K7N7A8 449 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 RIGQ13278 110 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 OR5R1Q8NH85 324 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 SNX22Q96L94 193 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 G6PC2Q9NQR9 355 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 H3BQ15 152 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 CELA2AP08217 269 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 CRISP2P16562 243 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
PTCD1-201ENST00000292478 CD81P60033 236 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM30BQ3MIR4 351 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 STPG1Q5TH74 334 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF645Q8N7E2 425 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 CHAC2Q8WUX2 184 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM54Q969K7 222 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 CLN8Q9UBY8 286 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 NAT2P11245 290 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 KNL1Q8NG31 2342 aa11.08□□□□□ -0.64
PTCD1-201ENST00000292478 HELTA6NFD8 242 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 KLF4O43474 513 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 CXCL2P19875 107 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 HOXA6P31267 233 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 MC5RP33032 325 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 MEOX2P50222 304 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 IL22RA2Q969J5 263 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 NPVFQ9HCQ7 196 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 PIN1P1O15428 100 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 PAGE4O60829 102 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 OR2J3O76001 311 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 P01737 135 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 ORM1P02763 201 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 RPL31P62899 125 aaKnown RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 OVCH2Q7RTZ1 564 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 FGF11Q92914 225 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 ERVFRD-1P60508 538 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 ASCL3Q9NQ33 180 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 SRSF10O75494 262 aaKnown RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 LAIR2Q6ISS4 152 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 MRPL30Q8TCC3 161 aaKnown RBP11.07□□□□□ -0.64
PTCD1-201ENST00000292478 SSMEM1Q8WWF3 244 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF714Q96N38 554 aa11.07□□□□□ -0.64
PTCD1-201ENST00000292478 DNASE2O00115 360 aaPredicted RBP11.06□□□□□ -0.64
PTCD1-201ENST00000292478 OR2H2O95918 312 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 IGLV3-19P01714 112 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 HBZP02008 142 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 FTH1P19P0C7X4 201 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 CD1BP29016 333 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM255AQ5JRV8 349 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 OR8G5Q8NG78 346 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 NEURL1O76050 574 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 SLC2A8Q9NY64 477 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 NDUFA2O43678 99 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 CLDN14O95500 239 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 CD74P04233 296 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF250P15622 560 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 NHLH1Q02575 133 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 NHLH2Q02577 135 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 GP6Q9HCN6 339 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms