RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SNX22Q96L94 193 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 ATXN7O15265 892 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-201ENST00000269318 ST8SIA3O43173 380 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 IL2RGP31785 369 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 SSTR5P35346 364 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 SNTB1Q13884 538 aaKnown RBP13.89□□□□□ -0.19
CCDC40-201ENST00000269318 GNMTQ14749 295 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 BAP18Q8IXM2 172 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 PDZD9Q8IXQ8 264 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 KDF1Q8NAX2 398 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-201ENST00000269318 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 ANGPTL6Q8NI99 470 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 Q8TCH9 128 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 SPIN2AQ99865 258 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 SPIN2BQ9BPZ2 258 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 REG4Q9BYZ8 158 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 PLEKHA2Q9HB19 425 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 PPP1R3CQ9UQK1 317 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 POMT1Q9Y6A1 747 aa13.89□□□□□ -0.19
CCDC40-201ENST00000269318 PIEZO1Q92508 2521 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 TAAR5O14804 337 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 ADAM20O43506 726 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 ADH4P08319 380 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 OR4A8P0C604 315 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 DRAM1Q8N682 238 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 GALNT11Q8NCW6 608 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 ST6GALNAC3Q8NDV1 305 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 ERGIC1Q969X5 290 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 C11orf1Q9H5F2 150 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 RNF7Q9UBF6 113 aa13.88□□□□□ -0.19
CCDC40-201ENST00000269318 RCL1Q9Y2P8 373 aaKnown RBP13.88□□□□□ -0.19
CCDC40-201ENST00000269318 RBM7Q9Y580 266 aaKnown RBP13.88□□□□□ -0.19
CCDC40-201ENST00000269318 PLCE1Q9P212 2302 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 K7N7A8 449 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 MGST3O14880 152 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 C1QTNF9P0C862 333 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 TNFSF4P23510 183 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 EDDM3AQ14507 147 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 AANATQ16613 207 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 CR1LQ2VPA4 569 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 FAM201AQ5SY85 155 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 DCTN5Q9BTE1 182 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ARID1AO14497 2285 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ODAMA1E959 279 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 MFSD2BA6NFX1 497 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 CD80P33681 288 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ASCL1P50553 236 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 CASP6P55212 293 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 KIAA2026Q5HYC2 2103 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ZNRF1Q8ND25 227 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 PPP1R35Q8TAP8 253 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ARL11Q969Q4 196 aa13.87□□□□□ -0.19
CCDC40-201ENST00000269318 BARX1Q9HBU1 254 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-201ENST00000269318 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 IGKV1-39P01597 117 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 IGKV1D-39P04432 117 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 SERPINE2P07093 398 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 CD55P08174 381 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 P2RY1P47900 373 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 HTD2P86397 168 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 EIF4EBP1Q13541 118 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-201ENST00000269318 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 MARVELD3Q96A59 401 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 C5orf30Q96GV9 206 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 ABHD14BQ96IU4 210 aa13.86□□□□□ -0.19
CCDC40-201ENST00000269318 A0A0G2JRQ6 117 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 CYB5R3P00387 301 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 PPP1CCP36873 323 aaKnown RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 NKX2-1P43699 371 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 TMEM33P57088 247 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 ZNF585BQ52M93 769 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 STUMQ69YW2 141 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 DMRTC2Q8IXT2 367 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 ZBTB34Q8NCN2 500 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 SDSLQ96GA7 329 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 DIRC2Q96SL1 478 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 OR2S2Q9NQN1 319 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 ZC4H2Q9NQZ6 224 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 LIN7CQ9NUP9 197 aaKnown RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 SDHAF2Q9NX18 166 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 FBXL17Q9UF56 701 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 PCNX1Q96RV3 2341 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 SHISA9B4DS77 424 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 PITX3O75364 302 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 P2RX3P56373 397 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 ID3Q02535 119 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 MSMO1Q15800 293 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 CXorf66Q5JRM2 361 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 RPL7L1Q6DKI1 246 aaKnown RBP13.85□□□□□ -0.19
CCDC40-201ENST00000269318 NINJ1Q92982 152 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms