RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 SCCPDHQ8NBX0 429 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 C10orf35Q96D05 121 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF488Q96MN9 340 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 SF3B5Q9BWJ5 86 aaKnown RBP10.02□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF552Q9H707 407 aaPredicted RBP10.02□□□□□ -0.8
VPS33A-201ENST00000267199 GBF1Q92538 1859 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 A0A1B0GTI1 187 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 LINC01387J3KSC0 135 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 HRASP01112 189 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 MRGPRDQ8TDS7 321 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 GDF15Q99988 308 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM14DPA8MWL7 114 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 IL2RAP01589 272 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 USF1P22415 310 aaPredicted RBP10.02□□□□□ -0.81
VPS33A-201ENST00000267199 RPS23P62266 143 aaKnown RBP10.02□□□□□ -0.81
VPS33A-201ENST00000267199 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
VPS33A-201ENST00000267199 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 C11orf42Q8N5U0 333 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 CORO2AQ92828 525 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 DOCK9Q9BZ29 2069 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 M0QZK8 103 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.81
VPS33A-201ENST00000267199 SCTP09683 121 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
VPS33A-201ENST00000267199 ALKBH6Q3KRA9 238 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 C1QL2Q7Z5L3 287 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 OR10AD1Q8NGE0 317 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 COMMD5Q9GZQ3 224 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM38BQ9NVV0 291 aa10.02□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM30CPA0ZSE6 113 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 DBX1A6NMT0 343 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 PATE3B3GLJ2 98 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 SLC25A47Q6Q0C1 308 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 DTD1Q8TEA8 209 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 EDARADDQ8WWZ3 215 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 RSPO3Q9BXY4 272 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-201ENST00000267199 CLN8Q9UBY8 286 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 TUBD1Q9UJT1 453 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 SIAH2O43255 324 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-201ENST00000267199 SELEP16581 610 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM211Q6ICI0 200 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 OR2H1Q9GZK4 316 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 NAGKQ9UJ70 344 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 FNDC1Q4ZHG4 1894 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-201ENST00000267199 TRPM7Q96QT4 1865 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 IGKV1D-43A0A0B4J1Z2 117 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 G6PCP35575 357 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 MYOZ1Q9NP98 299 aaPredicted RBP10.01□□□□□ -0.81
VPS33A-201ENST00000267199 MANBALQ9NQG1 85 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 TCFL5Q9UL49 500 aa10.01□□□□□ -0.81
VPS33A-201ENST00000267199 TRGV5A0A0B4J1U4 118 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 CTXND1A0A1B0GTU2 59 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 HOXA6P31267 233 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 HES3Q5TGS1 186 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 FAM27BQ5VT28 67 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 DYNLRB1Q9NP97 96 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 A0A0U1RQV5 110 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 A0A1W2PR77 199 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 BMPR1BO00238 502 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 EGR1P18146 543 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 GLIPR1P48060 266 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 ZNF718Q3SXZ3 478 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 ZPBPQ9BS86 351 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM222Q9H0R3 208 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 DUSP15Q9H1R2 295 aaPredicted RBP10□□□□□ -0.81
VPS33A-201ENST00000267199 DIRC3C9JPN6 131 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 NDUFB4O95168 129 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 CSN3P07498 182 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 SNRPCP09234 159 aaKnown RBP10□□□□□ -0.81
VPS33A-201ENST00000267199 FOXO1Q12778 655 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 SSPNQ14714 243 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 DHRS13Q6UX07 377 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 GTF2H5Q6ZYL4 71 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 TUSC5Q8IXB3 177 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 GPR35Q9HC97 309 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 FZR1Q9UM11 496 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 SPTBN1Q01082 2364 aaKnown RBP10□□□□□ -0.81
VPS33A-201ENST00000267199 GRIFINA4D1Z8 144 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 COLCA2A8K830 154 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 HOXA5P20719 270 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 STUMQ69YW2 141 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 Q8WTZ3 238 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 RBKSQ9H477 322 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 OR2W1Q9Y3N9 320 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 POLEQ07864 2286 aa10□□□□□ -0.81
VPS33A-201ENST00000267199 COX7A2P2O60397 106 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 C3AR1Q16581 482 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RTN4RQ9BZR6 473 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 NBASA2RRP1 2371 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 M0R2Z0 102 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 GCGP01275 180 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms