RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TRAV39A0A0B4J263 110 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 IGHV5-51A0A0C4DH38 117 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 A0A0J9YY10 115 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 A0A0U1RQK1 487 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 TNFRSF10CO14798 259 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 CT45A8P0DMV1 189 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 CT45A9P0DMV2 189 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 IGLC2P0DOY2 106 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 DEFA4P12838 97 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 EFNA3P52797 238 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 TAS2R46P59540 309 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 POU3F1Q03052 451 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 TMEM267Q0VDI3 215 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 CT45A2Q5DJT8 189 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 TMEM108Q6UXF1 575 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SPEM1Q8N4L4 309 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF519Q8TB69 540 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF501Q96CX3 271 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 LIN37Q96GY3 246 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 OR5B12Q96R08 314 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 OR10A2Q9H208 303 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 PRO3102Q9H379 93 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 PNO1Q9NRX1 252 aaKnown RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 PXMP4Q9Y6I8 212 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SPACA6W5XKT8 324 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 TMEM150CB9EJG8 249 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 NUDT14O95848 222 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 KRTDAPP60985 99 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 GNMTQ14749 295 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SHBQ15464 509 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF440Q8IYI8 595 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 H1FOOQ8IZA3 346 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 BCORP1Q8N888 145 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 FAM71F1Q96KD3 344 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 PBOV1Q9GZY1 135 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 HIPK2Q9H2X6 1198 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 OR51I2Q9H344 312 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SLC35D1Q9NTN3 355 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SLC45A2Q9UMX9 530 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 GPR75O95800 540 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 SMIM10L1P0DMW3 83 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 CCR5P51681 352 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 RPL19P84098 196 aaKnown RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 IZUMO4Q1ZYL8 232 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 FAM69BQ5VUD6 431 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 LYSMD4Q5XG99 296 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 LIPHQ8WWY8 451 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 SLAMF6Q96DU3 332 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 SMIM10Q96HG1 83 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 VSTM2LQ96N03 204 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 OR2A5Q96R48 311 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 SF3B5Q9BWJ5 86 aaKnown RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 PARLQ9H300 379 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 WNT16Q9UBV4 365 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ERRFI1Q9UJM3 462 aaPredicted RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 DIDO1Q9BTC0 2240 aaKnown RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 KIR2DS5A0A0G2JLQ3 304 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 A0A0G2JNG1 304 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 KIR2DS3K7RE56 304 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 MMP23AO75900 390 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 IGKV1-33P01594 117 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 PAX9P55771 341 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 KIR2DS5Q14953 304 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 CISD2Q8N5K1 135 aaKnown RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 GPER1Q99527 375 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 NUDT22Q9BRQ3 303 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 AGMATQ9BSE5 352 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
VAPB-201ENST00000265619 FBLN5Q9UBX5 448 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ST3GAL6Q9Y274 331 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 VSTM2BA6NLU5 285 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 TYMSP04818 313 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ZNF728P0DKX0 622 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 NPPCP23582 126 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 LHX2P50458 406 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 TAS2R30P59541 319 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 EMC4Q5J8M3 183 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 Q6ZPA2 131 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ZNF114Q8NC26 417 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 OR5D14Q8NGL3 314 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 PSMF1Q92530 271 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 UCN2Q96RP3 112 aa7.53□□□□□ -1.2
VAPB-201ENST00000265619 ADAMTS9Q9P2N4 1935 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 GYPAP02724 150 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 AADACP22760 399 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 CBLN1P23435 193 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms