RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ATP5SQ99766 215 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 NCOR1P1Q9H4R4 102 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 RTTNQ86VV8 2226 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 SPAARA0A1B0GVQ0 90 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 CDIPTO14735 213 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 IDH3GP51553 393 aaPredicted RBP9.37□□□□□ -0.91
MSH3-201ENST00000265081 TCTEX1D1Q8N7M0 179 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
MSH3-201ENST00000265081 BTBD17A6NE02 478 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 SSSCA1O60232 199 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 OR3A1P47881 315 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 CCL11P51671 97 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 BRWD1-AS2P59051 145 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 FLI1Q01543 452 aaPredicted RBP9.37□□□□□ -0.91
MSH3-201ENST00000265081 OR10Z1Q8NGY1 313 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 NARS2Q96I59 477 aaKnown RBP9.37□□□□□ -0.91
MSH3-201ENST00000265081 YPEL4Q96NS1 127 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 TMEM231Q9H6L2 316 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 NDUFS6O75380 124 aaKnown RBP9.37□□□□□ -0.91
MSH3-201ENST00000265081 GLI4P10075 376 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 ATP6V0CP27449 155 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
MSH3-201ENST00000265081 TMEM30CPA0ZSE6 113 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 OOEPA6NGQ2 149 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 S100GP29377 79 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 SULT1A1P50225 295 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 EIF2S3LQ2VIR3 472 aaKnown RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 DRAM1Q8N682 238 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 C15orf65H3BRN8 121 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 CHST1O43916 411 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 ZNF44P15621 663 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 DYNLT3P51808 116 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 ARHGDIBP52566 201 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 Q6ZS92 163 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 CXorf67Q86X51 503 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 GCNT2Q8N0V5 402 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 GPHA2Q96T91 129 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 AIFM2Q9BRQ8 373 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 ZC4H2Q9NQZ6 224 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 WASF3Q9UPY6 502 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 COLCA2A8K830 154 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 SIRPB1O00241 398 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 GUK1Q16774 197 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 PDLIM3Q53GG5 364 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 PARP12Q9H0J9 701 aaKnown RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 OR5H1A6NKK0 313 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 WDR1O75083 606 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 FHITP49789 147 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 HTD2P86397 168 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 TCF15Q12870 199 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 PEA15Q15121 130 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
MSH3-201ENST00000265081 OR51B6Q9H340 312 aa9.36□□□□□ -0.91
MSH3-201ENST00000265081 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 CELSR3Q9NYQ7 3312 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 C12orf77C9JDV5 145 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 NXPH2O95156 264 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 LHBP01229 141 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 MDKP21741 143 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 NKX6-1P78426 367 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 FIP1L1Q6UN15 594 aaKnown RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 NEK7Q8TDX7 302 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 ZNF737O75373 536 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 CD80P33681 288 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 BHLHA15Q7RTS1 189 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 HSPB7Q9UBY9 170 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 TSPAN15O95858 294 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 F12P00748 615 aaPredicted RBP9.35□□□□□ -0.91
MSH3-201ENST00000265081 SWI5Q1ZZU3 235 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
MSH3-201ENST00000265081 TNFSF12O43508 249 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 TIMP3P35625 211 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 BEND4Q6ZU67 534 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 C15orf54Q8N8G6 183 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 FAM222BQ8WU58 562 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 AGMATQ9BSE5 352 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 KIAA1456Q9P272 454 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 TRAPPC2LQ9UL33 140 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 LOC400499M0QZD8 3231 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 IGLV3-9A0A075B6K5 115 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 AGFG2O95081 481 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms