RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 VPREB3Q9UKI3 123 aa5.85□□□□□ -1.47
DEPDC1B-201ENST00000265036 NOTCH3Q9UM47 2321 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 SH2D7A6NKC9 451 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 BUB1B-PAK6H3BSN5 160 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 J3QRK9 145 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 BET1O15155 118 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 ST8SIA5O15466 376 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 HSPA12AO43301 675 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 ORC5O43913 435 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 CA11O75493 328 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 EIF4EP06730 217 aaKnown RBP5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 RNASE1P07998 156 aaKnown RBP5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 FCGR3AP08637 254 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 HLA-DRB3P79483 266 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 CDNFQ49AH0 187 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 IGSF11Q5DX21 431 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 RNASE12Q5GAN4 147 aaKnown RBP5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 ZNF596Q8TC21 504 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 TOMM40LQ969M1 308 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 RPEQ96AT9 228 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 PHF21AQ96BD5 680 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 ABCB10Q9NRK6 738 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 DPM3Q9P2X0 92 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 HSF4Q9ULV5 492 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 NOTCH1P46531 2555 aa5.84□□□□□ -1.47
DEPDC1B-201ENST00000265036 A0A087X0M5 115 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 A0A0A6YYJ9 748 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 IGKV1-6A0A0C4DH72 117 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 A0A1B0GX30 115 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 CD34P28906 385 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 RPL5P46777 297 aaKnown RBP5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 OR3A3P47888 321 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 HABP2Q14520 560 aaPredicted RBP5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 HERPUD1Q15011 391 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 HMGN3Q15651 99 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 TPTE2P1Q5T6R2 138 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 C16orf87Q6PH81 154 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 LYG1Q8N1E2 194 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 GALMQ96C23 342 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 ST6GALNAC5Q9BVH7 336 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 DPAGT1Q9H3H5 408 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 LINC00574Q9H8X3 128 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 ABRACLQ9P1F3 81 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 SPATA2Q9UM82 520 aa5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 TBL2Q9Y4P3 447 aaKnown RBP5.84□□□□□ -1.48
DEPDC1B-201ENST00000265036 LEUTXA8MZ59 168 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ZNF736B4DX44 427 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 H3BMQ9 156 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 HSD17B6O14756 317 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 TIMM23O14925 209 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 HPGDSO60760 199 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 GLAP06280 429 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 GSTT2P0CG29 244 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 GSTT2BP0CG30 244 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 MDKP21741 143 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 TALDO1P37837 337 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 PRRX1P54821 245 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 GNG2P59768 71 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 HNF4GQ14541 408 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 CT45A1Q5HYN5 189 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 CCBE1Q6UXH8 406 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 DRAM1Q8N682 238 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 GVQW1Q8N7I0 195 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 OR2AK2Q8NG84 335 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 CT45A3Q8NHU0 189 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 PIFOQ8TCI5 191 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 FAM216AQ8WUB2 273 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ISOC1Q96CN7 298 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ABHD14BQ96IU4 210 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ABHD14AQ9BUJ0 271 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 PRDM13Q9H4Q3 707 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 NCOR1P1Q9H4R4 102 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 Q9N2K0 584 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 RNF150Q9ULK6 438 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 MRPS7Q9Y2R9 242 aaKnown RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SIGLEC9Q9Y336 463 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ETV7Q9Y603 341 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SERPINE3A8MV23 424 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 H3BUI4 141 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 FABP7O15540 132 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SSX5O60225 188 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 CRYBA1P05813 215 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 HES1Q14469 280 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 TMEM95Q3KNT9 176 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ZNF260Q3ZCT1 412 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 MORN2Q502X0 79 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 UBE2NLQ5JXB2 153 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 TMEM69Q5SWH9 247 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 DHRS7BQ6IAN0 325 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ZNF880Q6PDB4 577 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 MOB1BQ7L9L4 216 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SNX29P2Q8IUI4 249 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 ZNF439Q8NDP4 499 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 PTX4Q96A99 478 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 MALSU1Q96EH3 234 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 DCUN1D5Q9BTE7 237 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 POMT1Q9Y6A1 747 aa5.83□□□□□ -1.48
DEPDC1B-201ENST00000265036 SAA2-SAA4A0A096LPE2 208 aa5.82□□□□□ -1.48
DEPDC1B-201ENST00000265036 A0A1W2PPI3 338 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms