RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LIN7CQ9NUP9 197 aaKnown RBP17.03■□□□□ 0.32
CSPG5-201ENST00000264723 LOC102723996A0A087X1L8 192 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 C9JQL5 133 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 H7BYZ3 331 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 GAPDHP04406 335 aaKnown RBP17.02■□□□□ 0.32
CSPG5-201ENST00000264723 CD200P41217 278 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 DHRS7BQ6IAN0 325 aaPredicted RBP17.02■□□□□ 0.32
CSPG5-201ENST00000264723 C1orf87Q8N0U7 546 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 RAB39BQ96DA2 213 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 IGKV1-27A0A075B6S5 117 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 F8VVB4 439 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 F8VWA3 439 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 RPL36A-HNRNPH2H7BZ11 118 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 M0R1X1 148 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 CEBPDP49716 269 aaPredicted RBP17.02■□□□□ 0.32
CSPG5-201ENST00000264723 PSMB3P49720 205 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 RIPPLY2Q5TAB7 128 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 OR5A2Q8NGI9 324 aa17.02■□□□□ 0.32
CSPG5-201ENST00000264723 GAR1Q9NY12 217 aaKnown RBP17.02■□□□□ 0.32
CSPG5-201ENST00000264723 FGF16O43320 207 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 Q3ZCU0 254 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF880Q6PDB4 577 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 DNM1P46Q6ZS02 220 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 MRPL41Q8IXM3 137 aaKnown RBP17.02■□□□□ 0.31
CSPG5-201ENST00000264723 COMMD1Q8N668 190 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 TMEM37Q8WXS4 190 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 MOB3AQ96BX8 217 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 OR2D2Q9H210 308 aa17.02■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF552Q9H707 407 aaPredicted RBP17.02■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF705FA8MVS1 300 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 CYTIPO60759 359 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF705DP0CH99 300 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF705BP0CI00 300 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 C10orf128Q5T292 105 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 LRRC30A6NM36 301 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 NTN3O00634 580 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF665Q9H7R5 613 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 HSF4Q9ULV5 492 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 V9GYS6 101 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 DOCK11Q5JSL3 2073 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 AP4M1O00189 453 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 CRYABP02511 175 aaKnown RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 EIF2S3P41091 472 aaKnown RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 GNG10P50151 68 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 MALSU1Q96EH3 234 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 TMEM222Q9H0R3 208 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 ARV1Q9H2C2 271 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 WFDC1Q9HC57 220 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 FREM1Q5H8C1 2179 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 IGSF23A1L1A6 192 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 PHOX2AO14813 284 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 AESQ08117 197 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 FAM89BQ8N5H3 189 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 TMEM54Q969K7 222 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 OPN3Q9H1Y3 402 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 HIPK2Q9H2X6 1198 aa17.01■□□□□ 0.31
CSPG5-201ENST00000264723 ZNF703Q9H7S9 590 aaPredicted RBP17.01■□□□□ 0.31
CSPG5-201ENST00000264723 SYNGR2O43760 224 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 SYNGR3O43761 229 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 RND3P61587 244 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 RPS23P62266 143 aaKnown RBP17■□□□□ 0.31
CSPG5-201ENST00000264723 ZIC4Q8N9L1 334 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 CPEB3Q8NE35 698 aaKnown RBP17■□□□□ 0.31
CSPG5-201ENST00000264723 CCL17Q92583 94 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 PIEZO2Q9H5I5 2752 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 PRR14LQ5THK1 2151 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 J3QT63 122 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 CDS2O95674 445 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 DANCRP0C864 163 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 FAM157CP0CG43 387 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 FAM214BQ7L5A3 538 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 OR10P1Q8NGE3 313 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 LOXL4Q96JB6 756 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 SMIM8Q96KF7 97 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 EGLN1Q9GZT9 426 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 MAP1LC3B2A6NCE7 125 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 CCL20P78556 96 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 MAP1LC3BQ9GZQ8 125 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 OR1A1Q9P1Q5 309 aa17■□□□□ 0.31
CSPG5-201ENST00000264723 CARHSP1Q9Y2V2 147 aaKnown RBP17■□□□□ 0.31
CSPG5-201ENST00000264723 TIMM8BQ9Y5J9 83 aaPredicted RBP17■□□□□ 0.31
CSPG5-201ENST00000264723 FCGR3BO75015 233 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 RNF212Q495C1 297 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 LHFPL1Q86WI0 220 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 Q8IYB0 196 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 C1orf147Q96MC9 270 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-201ENST00000264723 TMPRSS5Q9H3S3 457 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 OPN1MWP04001 364 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 OPN1MW2P0DN77 364 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 OPN1MW3P0DN78 364 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 TECTAO75443 2155 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 PPP5D1E7EU14 171 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 PROB1E7EW31 1015 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 NUDT16L1Q9BRJ7 211 aaKnown RBP16.99■□□□□ 0.31
CSPG5-201ENST00000264723 TM2D1Q9BX74 207 aa16.99■□□□□ 0.31
CSPG5-201ENST00000264723 KITLGP21583 273 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 FGF7P21781 194 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 RPP30P78346 268 aaKnown RBP16.98■□□□□ 0.31
CSPG5-201ENST00000264723 SLC38A11Q08AI6 406 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms