RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
USE1-201ENST00000263897 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 SLC22A1O15245 554 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 CHATP28329 748 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 CD1BP29016 333 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 ZNF137PP52743 207 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 QRFPP83859 136 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 TRAM1Q15629 374 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 MORN2Q502X0 79 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 KPRPQ5T749 579 aaPredicted RBP12.74□□□□□ -0.37
USE1-201ENST00000263897 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 IZUMO1Q8IYV9 350 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 Q8N6K4 173 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 OR4X2Q8NGF9 303 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 OR10V1Q8NGI7 309 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 OR2T10Q8NGZ9 312 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 FAAP24Q9BTP7 215 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 CCDC90BQ9GZT6 254 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 OR2S2Q9NQN1 319 aa12.74□□□□□ -0.37
USE1-201ENST00000263897 TMEM14DPA8MWL7 114 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 CPEP16870 476 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 HSPA13P48723 471 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 RPS25P62851 125 aaKnown RBP12.73□□□□□ -0.37
USE1-201ENST00000263897 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
USE1-201ENST00000263897 UNC119Q13432 240 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 C6orf201Q7Z4U5 140 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 WFDC9Q8NEX5 89 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 MGLLQ99685 303 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
USE1-201ENST00000263897 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 TXNL1O43396 289 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 ARL6IP5O75915 188 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 BPNT1O95861 308 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 IGHG2P01859 326 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 PSMA1P25786 263 aaKnown RBP12.72□□□□□ -0.37
USE1-201ENST00000263897 MAP2K4P45985 399 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 HTD2P86397 168 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 NOL4LQ96MY1 436 aaPredicted RBP12.72□□□□□ -0.37
USE1-201ENST00000263897 GFI1Q99684 422 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 NICN1Q9BSH3 213 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 KCNK15Q9H427 330 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
USE1-201ENST00000263897 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 LINC01548A6NM66 108 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 NCBP2LA6PVI3 153 aaKnown RBP12.71□□□□□ -0.37
USE1-201ENST00000263897 SERPINE3A8MV23 424 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 ZNF736B4DX44 427 aaPredicted RBP12.71□□□□□ -0.37
USE1-201ENST00000263897 SLC17A2O00624 439 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 MOSP00540 346 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.37
USE1-201ENST00000263897 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 GALMQ96C23 342 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 PLGRKTQ9HBL7 147 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
USE1-201ENST00000263897 AK6Q9Y3D8 172 aaKnown RBP12.71□□□□□ -0.37
USE1-201ENST00000263897 LANCL1O43813 399 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 YPEL1O60688 119 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 NAPSAO96009 420 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 PF4V1P10720 104 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 ARSBP15848 533 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 PPP1CCP36873 323 aaKnown RBP12.7□□□□□ -0.38
USE1-201ENST00000263897 FABP5Q01469 135 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 GNMTQ14749 295 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 P2RY14Q15391 338 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 FAM89BQ8N5H3 189 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 Q8N9W7 124 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 CNBD2Q96M20 576 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 LPAR5Q9H1C0 372 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 ABCG5Q9H222 651 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 LIN7CQ9NUP9 197 aaKnown RBP12.7□□□□□ -0.38
USE1-201ENST00000263897 PLEKHJ1Q9NW61 149 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 LINC00527Q9UJ94 153 aa12.7□□□□□ -0.38
USE1-201ENST00000263897 A0A0A6YYD4 124 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 SOCS1O15524 211 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 RGS11O94810 467 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 CD33P20138 364 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 HMGN3Q15651 99 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 ZNF880Q6PDB4 577 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 FOXRED2Q8IWF2 684 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 S1PR3Q99500 378 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms